Methylococcus capsulatus: MCA0692
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Entry
MCA0692 CDS
T00205
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mca
Methylococcus capsulatus
Pathway
mca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MCA0692 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mca03400
]
MCA0692 (recD)
Enzymes [BR:
mca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MCA0692 (recD)
DNA repair and recombination proteins [BR:
mca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MCA0692 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
Helicase_RecD
UvrD-helicase
AAA_22
SLFN-g3_helicase
DEAD
AAA_16
UvrD_C
RecD_N
CbiA
AAA_25
AAA_28
nSTAND3
Cas_GSU0054
AAA_33
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AAU93176
UniProt:
Q60AZ4
LinkDB
All DBs
Position
726869..728680
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AA seq
603 aa
AA seq
DB search
MSAGESGYSSEHLLAAGFARRCLRWAKDPAAPGVLERAAFLASFATTDGHVCTDLAELAE
DFPQHGPDLLRTLLLGSGVVGTPGGEPRPLVLDDEGRLYLYRYFDYERRLASALQRLARG
RDSLTPPSEAVREQLNALFPPASGGPDWQKLAAALALLGRLTVISGGPGTGKTTTVVNLL
ACLLVQNPDCRIALAAPTGKAAARMLDALRERAAHLPGSLREKLPAAASTVHRLLGVIPG
SGNFRHHAGNPLAVDVLVVDEASMLDLGLATRLVEAVPVDGRLILLGDKDQLAAVEAGAV
FAELSADPRLSPPVIERLAALTQTDPAAIVTAAPVRSTPLEDCVVWFSRNYRFRSDSGIG
RLAARVNSGEADAVIAELRAGGESGVIWQEDGAAAPGAGLIETLLAGYADYLDVMRSGQA
APAAVFAAYNRFRILCAVRESPRGVEAINRLIAREFRRRLGLGADERAEWYPGRPVMVLR
NDYVLKLFNGDTGIVLADPSGELRVHFPDAGGGFRAIPPARLPEHETAFALTVHKSQGSE
FDEVALLLPDRISPVLTRELVYTGITRARRAVSLVGAAPVLAEAIRRRTRRHSGLIARLE
EIG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccggcgaatccggctactcttccgagcatctgctggccgccggcttcgcccgt
cgctgtctgcgctgggcgaaggacccggcggcgcccggggtgttggagcgggccgctttc
ctggccagtttcgccaccaccgacggtcatgtctgcaccgatctggccgaattggccgaa
gacttcccgcagcacggcccggacttgttgcggacgctgctgcttggttccggcgtggtc
ggcacgccggggggcgaaccccgcccgctggtcctggatgacgaagggcggctctatctt
taccgctatttcgactatgagcgtcgcctggcatctgctttgcagcggctggcgcgcggc
cgtgacagtctgacgccaccgtcggaagcggtgcgggagcagttgaacgctttgtttcct
cccgcatccggcggccccgactggcagaagctcgccgccgccctggccctgctgggccgg
ctcaccgtcatcagcggcgggccgggcaccggcaagaccaccacggtggtgaacctgctg
gcctgtctgctcgtccagaatccggactgccgcatcgccctggccgcgcccactggcaag
gccgcggcccgcatgctggatgcgttgcgtgagcgggcggcgcatctgcccgggtctctc
agggagaaacttccggccgccgccagtaccgttcaccgtctgctgggcgtgattccgggc
agcggaaattttcgccatcatgccgggaatcccttggccgtcgacgtgctggtggtcgac
gaggcgtcgatgctcgacctgggactggccacccggctggtcgaagcggtgcccgtcgac
ggccggctgatcctgctgggcgacaaggaccagctcgccgccgtggaggcgggggcggtg
ttcgccgaactcagcgccgacccacggctgtcaccgccggtcatcgagcgtctggcagcc
ctgacccagaccgatccggcggccatcgtcactgccgcgcccgtccgttccactccgctc
gaggattgtgtggtctggttcagccgcaactaccgtttccgcagcgattccggtattgga
cggctggcggcgcgggtcaactcgggcgaagcggatgcagtgatcgcggaattgcgggcc
ggcggagagagcggcgtgatctggcaggaggacggggccgccgcgcccggcgccggcctg
atcgagaccctgctggcgggctatgcggattacctggatgtcatgcgatccggccaggct
gcgccggcagccgtgttcgccgcctacaaccgtttccgcatcctgtgcgcggtgcgggaa
tccccgcgcggggtggaggcgatcaaccggctgatcgcccgggaatttcgccgccgcctc
ggtctgggagcggacgaacgggccgaatggtatcctggtcggccagtgatggttctgcgc
aacgactacgtgctgaagctgttcaacggcgacaccggcatcgttctggcggacccctcc
ggagaactgcgggtgcattttcccgatgccggcggcggattccgcgccatccccccggcc
aggctgcccgagcacgagaccgcattcgccctgaccgtgcacaaatcgcagggatcggag
ttcgacgaggtggcgctgctgttgccggaccgtatctcgccggtcctcacccgagagctg
gtttacaccggtattacccgcgccaggcgcgcggtatccctcgtcggcgccgcgccggtg
ctggcggaggccatccgccgccgcacccgccgccattccgggctgatcgcccgtctggaa
gagattgggtga
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