Macrococcoides canis: MCCS_24750
Help
Entry
MCCS_24750 CDS
T04838
Symbol
mfd_2
Name
(GenBank) Transcription-repair-coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mcak
Macrococcoides canis
Pathway
mcak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MCCS_24750 (mfd_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcak03400
]
MCCS_24750 (mfd_2)
Enzymes [BR:
mcak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MCCS_24750 (mfd_2)
DNA repair and recombination proteins [BR:
mcak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
MCCS_24750 (mfd_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
DEAD
UvrB_inter
CarD_TRCF_RID
Helicase_C
ResIII
UB2H
Zot
MFD_D3
IstB_IS21
RecG_dom3_C
AAA_22
Glyco_hydro_115
Amidase_6
Motif
Other DBs
NCBI-ProteinID:
ARQ08038
UniProt:
A0A1W7AEM4
LinkDB
All DBs
Position
complement(2291533..2295033)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKQIIDKLIYKDERFQDYNNAIGNKNILITGLNPSAKAMMLAESYMHHQKQMVVITSNLY
QAERLERDLVQLVNEEDVFKFPVQDIMIEEFSTKSPDLMQERIRTLTHLAKGQNGLFLIP
VNGLEKLISQKETFLKYHLEITLGIDIDLVEVQQRLIDMGYQKTERVTTLGEFSVRGGLI
DIYPMIGEPVRIELFDTEVDSIRAFDIDSQRSLHNIDKVELSTASEFIFSAEDLELMSEN
LSEAFENTRTKIKTNVRDDLRETYETVKLNMTELLNHNILRRMVKFAYREETTIADYFKE
DAIIVIDEYNRVIEAKDAAIRENSEFMESLIESGRGFIGQTFIKEGSFEALANKHKVAYF
TLFTASMTVELEEMFKFSCKPVQQFYGQYDLMFSEFDRYRKNDFNIVVLATNDTRKEKIK
SMLADMNLPVTFNVDESRAGISTIVQGDLSEGLELPYMKLVVITERELFKLRKEKPKRTQ
KKLSNAEKIKSYQELNIGDYVVHTHHGVGRYLGVETLVVNKLHKDYIKIQYKGTDQLFVP
VDQMSQVQKFVGSEDKDPKLNKLGGTEWKKTKARVQKNVEDIAEELLKLYQERERVEGYQ
FGPDTEEQENFEMDFPYEPTDDQKQSLVEIKSDMEKRKPMDRLLCGDVGYGKTEVAVRAA
FKAVMDGKQVAFLVPTTILAQQHYETIIERMQDYPVEVQMMSRFRTTKEINETKKGLKSG
FVDIVVGTHKLLGKDIVYKDLGLLIVDEEQRFGVTHKEKIKALKTNVDVLTLTATPIPRT
LHMSLLGVRDLSVIETPPENRFPVQTYVLEYQHNFIKEAMERELSRNGQVFYLYNRVATI
YQKAEQLEMMMPDARIAVAHGQMSERELEETMLGFINGEYDILVTTTIIETGVDVPNANT
LIIEDADRFGLSQLYQLRGRVGRSNRISYAYFLHAPNKVLTEVAEQRLQAIKEFTELGSG
FKIAMRDLNIRGAGNLLGKQQHGFIDSVGYDLYSEMLQQAVNEKRGIKEETTVPQLEIDV
EIDAYIPAEYIREEQAKIEFYKKLRSVTTEQELIDVQDEMTDRYGEYPEAVDHLMKIVEI
KINALSFGIVQVRDTGKSIELEASEATTTKVNGERLFKATESFGRDLKIEFKDNKLTFIL
KKQANWLSALVQLSHLIQEGIMMDGE
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaataattgataaactgatatataaagatgagcgatttcaagattataacaat
gcaatcggtaataaaaatatattaattactggattaaatccatctgcaaaagcgatgatg
ctcgctgaaagttacatgcatcatcaaaaacagatggttgttattacaagcaacctttat
caagctgaaagactagaaagagatcttgtacaactggtgaatgaagaagatgtttttaaa
tttcctgtacaagatattatgattgaagaattctctacaaagagtcccgatcttatgcaa
gaacgtataagaacccttacccatttggcaaaaggtcaaaatgggctatttctcattcca
gtaaatggactcgaaaaattaattagtcaaaaagaaactttcctaaaatatcatttagaa
attacgttaggtattgatatagacttagtggaagtgcagcaacgactcattgatatgggt
taccaaaagacagaacgagtaacgacattaggagaattttccgttcgtggagggctcatt
gatatatacccaatgattggtgaacctgtacgtatagaactgtttgatacagaagtagac
tcgatacgtgcatttgatatcgacagtcaacgttcgctgcataatatagacaaagtagaa
ttatctactgcaagtgaatttatcttttcagcagaagatttagaattgatgtcggaaaat
ctcagcgaagcatttgagaacacgcgtacgaagattaagacgaatgtcagagatgattta
agagaaacatatgaaacagtaaagctgaacatgacggagttgcttaatcataatatttta
cgacgtatggttaagttcgcttatcgtgaagagacgacaattgcagattattttaaagaa
gatgccatcatcgtaattgatgaatataatcgagtgattgaagcgaaagatgctgcaatc
cgtgagaatagtgaatttatggaatcactaattgaatctggccgtgggttcattgggcag
acatttatcaaagaaggtagttttgaagcgcttgcgaataaacacaaagttgcatatttc
actttatttactgcaagtatgaccgttgaattagaagagatgtttaagttttcatgtaaa
cctgttcagcaattttatggtcaatatgacttaatgttctcagagtttgatcgttatcgt
aagaatgactttaatattgtcgtgttagcaacaaatgatacgagaaaagaaaaaattaaa
tcgatgcttgctgatatgaatcttccggtaacctttaatgtcgatgaaagtagagctggt
atttcaacaattgtgcaaggggatctttcggaaggtcttgaacttccatatatgaaactg
gttgttataacagaaagagaactgtttaagttacgtaaggaaaaaccgaaacgcactcag
aaaaaattatcaaatgctgagaaaataaaatcgtatcaagaattaaatataggggattac
gttgttcatacacatcatggtgttgggcgttatctcggtgtagagacattagtcgttaat
aaactgcataaagactatattaagatccaatataaaggaacggatcaactgtttgtgcca
gttgatcagatgagtcaagtgcaaaaatttgttggttcagaagataaagacccaaagctg
aataaacttggcggaacagagtggaaaaaaacgaaagcacgcgtacaaaagaacgttgaa
gatattgcggaagaattattaaagctttaccaggagcgcgaacgcgtagaagggtatcaa
tttggtccagatactgaggaacaggaaaatttcgaaatggactttccatatgaaccaact
gatgatcaaaaacagagtcttgttgaaattaaaagcgatatggaaaagcgtaaaccgatg
gatcgtctgttatgcggagatgttgggtacggtaaaacagaagtagcagtacgtgctgcg
ttcaaagctgtaatggatggaaagcaagttgcatttctagtaccgacaacaatattagct
cagcagcattatgaaacgattattgaacgtatgcaggattatccggtagaagtacagatg
atgagtcgttttagaacgacaaaagaaattaatgaaacgaagaaaggactcaaatcagga
tttgtagatatcgttgtcggaacgcataaattacttggaaaagatatcgtatacaaagat
ctcggtctgttgatcgtagacgaagaacaacgttttggtgtgacgcataaagaaaaaatt
aaagcattaaagacgaatgtagatgtattaacactcacagcaacaccaattccaagaaca
ttgcacatgagtttgcttggtgtgcgagacttatcggtaatagagacaccaccggagaat
agattcccggtacagacatatgtactggagtaccagcataatttcataaaagaagcgatg
gaaagagaattatcaaggaatggacaagtgttttacctttataatcgtgtagctacaatc
tatcaaaaggcagaacagcttgagatgatgatgcccgatgcgagaattgcagttgcacac
ggacaaatgtcagaacgagaattagaagaaacgatgctcgggtttattaatggtgaatat
gatatcctcgttacaacgacgattatcgaaacaggtgtggatgtaccaaatgcgaataca
ttgattatagaagatgcagatcgtttcggattaagtcagctctatcagctacgtggacgt
gtcggtcgcagcaacagaatcagttacgcatacttccttcatgcaccgaataaagtactt
actgaagttgcagagcaaagattacaggcgattaaagaatttacggaacttggttcaggt
tttaaaattgcgatgcgtgatctgaacattcgtggtgcaggtaatctattaggtaaacag
cagcacggattcattgactcggttggatatgacctttattcagaaatgctgcagcaagca
gtaaacgaaaaaagaggaattaaagaggaaacaacggtaccacaattagagattgacgta
gaaatagatgcatatattcctgcagaatatataagagaagaacaagcaaagattgagttt
tataagaaattacgtagtgttacaacagaacaggaactgattgacgtacaagatgaaatg
acagatcgttacggggaatatccagaagcggtagatcatctcatgaaaattgttgaaatt
aaaataaatgcattaagtttcggtattgttcaagtgagagacacaggaaaatcgatcgaa
ctggaagcttcagaagctacaacgactaaagttaatggcgagcgattatttaaggcgaca
gaatcttttggcagagacttgaagattgaatttaaagataataaactgacatttatatta
aagaagcaggcgaattggttatctgcacttgtgcaactctctcatttaattcaggaagga
attatgatggatggagaataa
DBGET
integrated database retrieval system
