Mus caroli (Ryukyu mouse): 110284749
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Entry
110284749 CDS
T05910
Gene name
Zeb1
Definition
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05202
Transcriptional misregulation in cancer
mcal05206
MicroRNAs in cancer
mcal05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110284749 (Zeb1)
05206 MicroRNAs in cancer
110284749 (Zeb1)
09162 Cancer: specific types
05215 Prostate cancer
110284749 (Zeb1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain only, AbdB
110284749 (Zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_6
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
110284749
NCBI-ProteinID:
XP_021006282
Ensembl:
MGP_CAROLIEiJ_G0021973
UniProt:
A0A6P5NYU7
LinkDB
All DBs
Position
18
AA seq
1114 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVEANSDSDDEDKLHIVEEESITDAADCEGGMPDD
ELPADQTVLPGGSDRGGGAKNCWQDNVKDNECDSDAENEQNHDPNVEEFLQQQDTAVIYP
EAPEEDQRQGTPEASSHDENGTPDAFSQLLTCPYCDRGYKRFTSLKEHIKYRHEKNEDNF
SCSLCSYTFAYRTQLERHMTSHKSGREQRHVTQSGGNRKFKCTECGKAFKYKHHLKEHLR
IHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVNGRPRSGLKTSQCSSPSLSTSP
GSPTRPQIRQKIENKPLQEPLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFSSGGQ
LQAASSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNVIRQVLETNQASLASKE
QEAVSASSIQQGGHSVISAISLPLVDQDGTTKIIINYSLEQPSQLQVVPQNLKKENPAPT
NSCKSEKLPEDLTVKSEMDKSFEGARDDSTCLLCEDCPGDLNALPELKHYDPECPAQPPP
PAPATEKPESSASSAGNGDLSPSQPPLKNLLSLLKAYYALNAQPSTEELSKIADSVNLPL
DVVKKWFEKMQAGQIPGQSPEPPSPGTGSVNIPTKTDEQPQPAEGTETQADSTRAQSPLK
IRSSPVLPEGSAINGSRSCTSSPSPLNLCSARNPQGYACVAEGAQEEPQVEPLDLSLPKQ
QGELLERSTVSSVYQNSVYSIQEEPLNLSCAKKEPQKDSCVTDSEPVVNVVPPSANPINI
AIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSATVSPAVQEPPVKVIQ
PNGNQDERQDTSSEGVSTVEDQNDSDSTPPKKKTRKTENGMYACDLCDKIFQKSSSLLRH
KYEHTGKRPHECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHR
YSYCKRGAEDRDAMEQEDAGPEVLPEVLTTEHVGARASPSQADSDERESLTREEDEDSEK
EEEEEDKEMEELQEGKECENPQGEEEEEEEEEEEEEEEEVEADEAEHEAAAKTDGTVEDG
AAQQAGSLEQKASESEMESESESEQLSEEKTNEA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataatactgtggtagaagcaaattcagattccgatgatgaagacaaactccat
attgtggaagaagaaagtattacagatgcagctgactgtgaaggtggcatgccagatgat
gaattgccagcagaccagacagtgttaccaggaggcagtgacagggggggcggtgccaag
aactgctggcaagacaacgtaaaagacaatgagtgtgactcagatgcagaaaatgagcaa
aaccatgatccgaatgtggaagagtttctgcagcaacaagacaccgccgtcatttatcca
gaggcacctgaggaagaccagcggcagggcacaccagaagccagcagtcatgacgaaaac
ggaacaccagacgcattttcccagttgctcacctgcccgtattgtgatagaggctacaag
cgctttacctctttgaaagaacacattaagtaccgccatgagaagaacgaggacaacttc
agctgctccctgtgcagttacacctttgcatacagaacccagcttgaacgtcatatgaca
tcacataagtcaggaagagagcaaagacatgtgacccagtctgggggaaaccgtaaattc
aaatgcactgaatgtgggaaagccttcaagtacaaacaccacctgaaagagcacttacgg
attcacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttctcattct
ggctcctatagctcacatataagcagtaagaagtgtattagcttgatgcctgtgaatggt
aggcctagatcaggactcaagacatctcagtgttcctcgccatctctttcgacatcacca
ggcagtcccacacgcccacagatacgacagaagatagagaataaaccccttcaagaaccg
ctttctgtaaaccaaatcaaaactgaacctgtggattatgagttcaaacccatagtggtt
gcttcaggaatcaactgttcaacccctttacaaaatggggtttttagcagtggtggccaa
ttgcaggcagccagttctcctcagggtgtggtgcaagccgttgttctgccgacagttggt
ctggtatctcccataagtatcaacttgagtgacattcagaatgtacttaaagtggctgta
gatggtaacgtaatacgacaagtcttggagactaatcaagccagtcttgcatccaaagag
caagaagcagtgagtgcttcatccatccagcagggtggccattctgtcatttctgccatc
agtcttcctttagttgatcaggatggaacaaccaaaatcatcatcaactacagtcttgag
cagcccagtcagcttcaggttgttccccagaatttaaagaaagaaaacccagcccctaca
aatagctgcaaaagtgagaagttaccagaagaccttactgtcaaatcagaaatggacaaa
agctttgaaggggccagggacgatagcacttgccttctgtgtgaggactgcccaggggac
ctcaatgcacttccagaactaaagcactatgatccagagtgccctgctcagcctccaccc
cctgccccagccacagagaagccagagtcctctgcttcctcagctggaaatggagatttg
tctcccagtcagccacctttaaagaaccttctgtcactcttaaaagcctactatgctctg
aacgcgcagccaagcacagaagagctctcaaagattgccgattctgtgaacctaccactg
gatgtagttaaaaagtggtttgagaaaatgcaagctggacagattccaggacagtctcct
gaaccaccttctcctggaacagggtctgtaaacatacctacaaaaaccgatgagcagcct
caacctgcagagggaactgagacccaggcagacagcacacgtgcacagagtcctctcaag
atcaggagctctccggttttaccggaaggatcagccattaacggttccagaagttgcaca
tcatccccgtcccctctaaacctttgctcagccaggaacccgcagggttacgcttgtgtg
gcagagggtgcccaggaggagccccaagtagaacctcttgatctctcactaccaaagcaa
cagggagagttactggaaaggtcgacagtcagtagcgtttaccagaacagtgtttattct
atccaggaagaacccttgaacttgtcttgtgcaaaaaaggaaccacaaaaggacagctgt
gttacagactcagaaccagttgtaaatgtagtcccaccaagtgccaaccccataaacatt
gctattcctacagtcactgcccagttacccacaatcgtggccattgctgaccagaacagt
gttccatgtttaagggcactggccgccaacaagcagactattctgattccccaagtggca
tatacatattcagctacagtgagccctgccgtgcaggagccaccagtgaaggtgatccag
ccaaatggaaaccaggatgaaagacaagacactagctcagaaggagtctccactgtggag
gaccagaatgactctgactccacgccacccaaaaagaaaactcggaagacagagaatgga
atgtatgcatgtgacctgtgtgacaagatatttcagaagagcagctcactgttgagacac
aaatatgagcacacaggtaagaggcctcacgagtgtggaatctgtagaaaggcatttaaa
cacaagcatcatttgattgagcatatgcggctgcactctggggaaaagccctatcaatgt
gacaagtgtggcaagcgcttctcacactccggctcctactctcaacacatgaatcaccgc
tactcctactgcaagagaggagctgaagacagagatgccatggagcaggaagacgctggg
cccgaagtcctgccggaagtcctgacgactgagcatgttggtgcccgggcatctccctca
caggctgactcggacgagagagaaagtttgacaagggaagaggatgaagacagtgaaaag
gaggaggaagaggaagataaagagatggaagaattacaggaaggaaaggaatgtgagaac
ccacagggggaggaggaagaggaggaggaagaagaagaagaggaagaagaggaggaagtg
gaggcggatgaagcggagcatgaggcagcagccaagactgatggtacagtggaggacgga
gctgcacagcaggcaggcagcttagagcagaaggccagcgagagcgagatggagagcgag
agcgagagtgagcaactgtcggaagagaagacaaatgaagcttag
DBGET
integrated database retrieval system
