Mus caroli (Ryukyu mouse): 110285841
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Entry
110285841 CDS
T05910
Symbol
Fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03030
DNA replication
mcal03410
Base excision repair
mcal03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110285841 (Fen1)
03410 Base excision repair
110285841 (Fen1)
03450 Non-homologous end-joining
110285841 (Fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcal03032
]
110285841 (Fen1)
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110285841 (Fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcal04147
]
110285841 (Fen1)
DNA replication proteins [BR:
mcal03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
110285841 (Fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
110285841 (Fen1)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
110285841 (Fen1)
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110285841 (Fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
XPG_I_2
DUF3560
HHH_5
tRNA_bind_2
Motif
Other DBs
NCBI-GeneID:
110285841
NCBI-ProteinID:
XP_021007945
Ensembl:
MGP_CAROLIEiJ_G0022682
UniProt:
A0A6P5P2N6
LinkDB
All DBs
Position
19:complement(7423998..7429199)
Genome browser
AA seq
380 aa
AA seq
DB search
MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET
TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGME
EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM
DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESIRG
IGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHKEAQQLFLEPEVLDPESVELKWSE
PNEEELVKFMCGEKQFSEERIRSGVKRLSKSRQGSTQGRLDDFFKVTGSLSSAKRKEPEP
KGPAKKKAKTGGAGKFRKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcaaggccttgccaaactaattgctgatgtggcccccagtgccatccgtgag
aatgacatcaagagctactttggtcgcaaagtggccatcgatgcctctatgagcatctac
cagttcctgattgctgttcgtcagggtggggatgtgctgcagaacgaggagggtgagacc
accagccacctgatgggcatgttctaccgtaccatccgaatgatggagaatggcatcaag
cctgtgtacgtctttgatggcaaaccaccacagctgaagtcaggtgagctggccaagcgc
agtgagaggcgcgccgaggctgagaagcaactgcagcaggctcaggaggctgggatggag
gaggaggtggagaagttcaccaagcggctcgtgaaggtcaccaagcaacacaatgatgag
tgcaaacacctgctgagcctcatgggcatcccttaccttgatgcacccagcgaggcagag
gccagctgtgctgccctggcaaaggctggcaaagtctatgctgcggccacagaggacatg
gactgcctcacttttggcagccccgtgctaatgcgacacttaactgccagtgaggccaag
aagctgcccatccaagagttccacctgagccgcgtcctgcaggagctgggtctgaaccag
gagcagtttgtggatctgtgcatcctgctgggtagcgactactgcgagagtatccgtggc
attgggcccaagcgggctgtggatctcatccagaagcataagagcatcgaggagatcgtg
aggcggctcgacccaagcaagtaccctgttccagagaactggctccacaaggaagcccag
cagctcttcctggagccggaagtactggacccagagtctgtggagctgaagtggagcgag
ccaaatgaagaagagttggtcaaatttatgtgtggtgaaaagcagttttctgaagagcga
attcgcagtggggtcaagcggctgagtaagagccgccagggcagcacccagggacgcctc
gatgatttcttcaaggtgacaggctcactctcctcagctaagcgcaaggagccagaaccc
aaggggcctgctaagaagaaagcaaagactgggggagcggggaagttccgaaagggaaaa
taa
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integrated database retrieval system