Mus caroli (Ryukyu mouse): 110290048
Help
Entry
110290048 CDS
T05910
Gene name
Mmp9
Definition
(RefSeq) matrix metalloproteinase-9 isoform X1
KO
K01403
matrix metalloproteinase-9 (gelatinase B) [EC:
3.4.24.35
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal01522
Endocrine resistance
mcal04657
IL-17 signaling pathway
mcal04668
TNF signaling pathway
mcal04670
Leukocyte transendothelial migration
mcal04915
Estrogen signaling pathway
mcal04926
Relaxin signaling pathway
mcal05161
Hepatitis B
mcal05200
Pathways in cancer
mcal05202
Transcriptional misregulation in cancer
mcal05205
Proteoglycans in cancer
mcal05206
MicroRNAs in cancer
mcal05215
Prostate cancer
mcal05219
Bladder cancer
mcal05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
110290048 (Mmp9)
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
110290048 (Mmp9)
04670 Leukocyte transendothelial migration
110290048 (Mmp9)
09152 Endocrine system
04915 Estrogen signaling pathway
110290048 (Mmp9)
04926 Relaxin signaling pathway
110290048 (Mmp9)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110290048 (Mmp9)
05202 Transcriptional misregulation in cancer
110290048 (Mmp9)
05206 MicroRNAs in cancer
110290048 (Mmp9)
05205 Proteoglycans in cancer
110290048 (Mmp9)
09162 Cancer: specific types
05219 Bladder cancer
110290048 (Mmp9)
05215 Prostate cancer
110290048 (Mmp9)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
110290048 (Mmp9)
09172 Infectious disease: viral
05161 Hepatitis B
110290048 (Mmp9)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
110290048 (Mmp9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110290048 (Mmp9)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.35 gelatinase B
110290048 (Mmp9)
Peptidases and inhibitors [BR:
mcal01002
]
Metallo peptidases
Family M10
110290048 (Mmp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PT
PG_binding_1
Reprolysin_4
Peptidase_M66
DUF4953
Reprolysin_3
Motif
Other DBs
NCBI-GeneID:
110290048
NCBI-ProteinID:
XP_021012181
Ensembl:
MGP_CAROLIEiJ_G0024677
UniProt:
A0A6P5PCK5
LinkDB
All DBs
Position
2
AA seq
730 aa
AA seq
DB search
MSPWQPLLLALLAFGCSSAAPYQRQPTFVVFPKDLKTSNLTDTQLAEEYLYRYGYTRAAQ
MMGEEQSLRPALLMLQKQLSLPQTGELDSQTLKAIRTPRCGVPDVGRFQTFKGLKWDHHN
ITYWIQNYSEDLPRDVIDDAFARAFAVWGEVAPLTFTRVYGPEADIVIQFGVAEHGDGYP
FDGKDGLLAHAFPPGPGVQGDAHFDDDELWSLGKGVVIPTYYGNSNGAPCHFPFTFEGRS
YSACTTDGRNDGTPWCSTTADYDTDGKFGFCPSERLYTEHGNGEGKPCVFPFIFEGRSYS
ACTTKGRSDGYLWCATTANYDQDKLYGFCPTRVDATVVGGNSAGERCVFPFVFLGKQYSS
CTKEGRRDGRLWCATTSNFDTDKKWGFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMY
PLYSYLEGFPLNKDDIDGIQYLYGRGSKPDPRPPATTTTEPQPTAPPTMCPTVPPTAYPT
VGPTVGPTGAPSPGPTSSPSPGPTGAPSPGPTAPPTAGSSEASTESLSPAGNPCNVDIFD
AIAEIQGALHFFKDGWYWKFLNHRGSPLQGPFLIARTWPALPATLDSAFEDPQTKRIFFF
SGRQLWVYTGKTVLGPRSLDKLGLGPEVTHVSGLLPRRPGKALLFSNGHIWRFDLKSQKV
DPQSVIRMDKEFSGVPWNSHDIFQYQDKAYFCHGKFFWRVSFQNEVNKVDHEVNQVDDVG
YVAYGLLQCP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgagcccctggcagcccctgctcctggctctcctggctttcggctgcagctctgctgcc
ccttaccagcgccagccgacttttgtggtcttccccaaagacctgaaaacctccaacctc
acggacacccagctggcagaggaatacttgtaccgctatggttacactcgggcagcccag
atgatgggggaggagcagtctctacggccggctttgctgatgcttcagaagcagctctcc
ctgccccagactggtgagctggacagccagacactaaaggccattcgaacaccacgctgt
ggtgtcccagatgtgggtcgattccaaaccttcaaaggcctcaagtgggaccatcataac
atcacatactggatccaaaactactctgaagacttgccgcgagacgtgatcgacgacgcc
ttcgcgcgcgccttcgcggtgtggggcgaggtggcaccgctcaccttcacccgcgtgtac
gggcccgaagcggacattgtcatccagtttggtgtcgcagagcacggagacgggtatccc
ttcgacggcaaggacggccttctggcacacgcctttccccctggccccggcgttcaggga
gatgcccatttcgacgacgacgagttgtggtcgctgggcaaaggcgtcgtgatccccact
tactatggaaactcaaatggtgccccatgtcactttcccttcacctttgagggacgctcc
tattcagcctgcaccacagacggccgcaacgacggcacgccttggtgtagcacgacagct
gactacgataccgacggcaaatttggtttctgccctagtgagagactctacacggagcac
ggcaacggagaaggcaaaccctgtgtgttcccgttcatctttgagggtcgctcctactct
gcctgcaccactaaaggccgctcggatggttatctctggtgtgccaccacagccaactat
gaccaggataaactgtatggcttctgccctacccgagtggacgcgaccgtagttgggggc
aactcggcaggagagcggtgcgtcttccccttcgtcttcctgggcaagcagtactcttcc
tgtaccaaagagggccgcagggatgggcgcctctggtgtgcgaccacatccaacttcgac
actgacaagaagtggggtttctgtccagaccaagggtacagcctgttcctggtggcagcg
cacgagttcggccatgcactgggcttagatcattccagcgtgccggaagcgctcatgtac
ccgctgtatagctacctcgagggcttccctctgaataaagacgacatagacggcatccag
tatctgtatggtcgtggctctaagcctgacccaaggcctccagccaccaccacaactgaa
ccacagccgacagcacctcccactatgtgtcccactgtacctcccacggcctatcccaca
gtgggccccacggttggccctacaggcgccccctcacctggccccacgagcagcccctca
cctggccctacaggcgccccctcacctggccctacagcgccccctaccgcgggctcttct
gaggcctctacagagtctttgagtccagcaggcaatccttgcaatgtggatatttttgat
gctattgcagagatccagggcgctctgcatttcttcaaggacggttggtactggaagttc
ctgaatcacagaggaagcccattacagggccccttcctcattgcccgcacgtggccagcc
ctgcctgcaacgctggactcagcctttgaggatccgcagaccaagaggattttcttcttc
tctggacgccaactgtgggtgtacacaggcaagaccgtgctgggccccaggagtctggat
aagttgggtctaggcccagaggtaacccacgtcagcgggcttctcccgcgtcgtcccggg
aaggctctgctgttcagcaacgggcatatctggagattcgacttgaagtctcagaaggtg
gatccccagagcgtcattcgcatggataaggagttctctggtgtgccctggaactcacac
gacatcttccagtaccaagacaaagcctatttctgccatggcaaattcttctggcgtgtg
agtttccaaaatgaggtgaacaaggtggaccatgaggtgaaccaggtggacgacgtgggc
tacgtggcctacggcctcctgcagtgcccttga
Mus caroli (Ryukyu mouse): 110299708
Help
Entry
110299708 CDS
T05910
Gene name
Mmp2
Definition
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal01522
Endocrine resistance
mcal04670
Leukocyte transendothelial migration
mcal04912
GnRH signaling pathway
mcal04915
Estrogen signaling pathway
mcal04926
Relaxin signaling pathway
mcal04933
AGE-RAGE signaling pathway in diabetic complications
mcal05200
Pathways in cancer
mcal05205
Proteoglycans in cancer
mcal05219
Bladder cancer
mcal05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
110299708 (Mmp2)
09152 Endocrine system
04912 GnRH signaling pathway
110299708 (Mmp2)
04915 Estrogen signaling pathway
110299708 (Mmp2)
04926 Relaxin signaling pathway
110299708 (Mmp2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110299708 (Mmp2)
05205 Proteoglycans in cancer
110299708 (Mmp2)
09162 Cancer: specific types
05219 Bladder cancer
110299708 (Mmp2)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
110299708 (Mmp2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
110299708 (Mmp2)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
110299708 (Mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110299708 (Mmp2)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
110299708 (Mmp2)
Peptidases and inhibitors [BR:
mcal01002
]
Metallo peptidases
Family M10
110299708 (Mmp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Peptidase_M66
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
110299708
NCBI-ProteinID:
XP_021025137
Ensembl:
MGP_CAROLIEiJ_G0031373
UniProt:
A0A6P7R893
LinkDB
All DBs
Position
8
AA seq
662 aa
AA seq
DB search
MEARVAWGALAGPLRVLCVLCCLLGRAIAAPSPIIKFPGDVAPKTDKELAVQYLNTFYGC
PKESCNLFVLKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANYNFFPRKPKWD
KNQITYRIIGYTPDLDPETVDDAFARALKVWSDVTPLRFSRIHDGEADIMINFGRWEHGD
GYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFN
GREYSSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNADGQPCKFPFRFQGT
SYNSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKY
ESCTSAGRNDGKVWCATTTNYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGAL
MAPIYTYTKNFRLSHDDIKGIQELYGPSPDADTDTGTGPTPTLGPVTPEICKQDIVFDGI
AQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGN
EYWVYSASTLERGYPKPLTSLGLPPDVQQVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKM
DPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWL
GC
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaggcacgagtggcctggggagcgctcgccggacctctgcgggttctctgcgtcctg
tgctgcctgttgggccgcgccatcgctgcaccgtcgcccatcatcaagttccccggcgat
gtcgcccctaaaacagacaaagagttggcagtgcaatacctgaacactttctatggctgc
cccaaggaaagttgcaacctctttgtgctgaaggataccctcaagaagatgcagaagttc
tttgggctgccccagacaggtgaccttgaccagaacaccattgagaccatgcggaagcca
agatgtggtaacccagatgtggccaactacaacttcttcccccgcaagcccaagtgggac
aagaaccagatcacatacaggatcattggttacacgcctgacctggaccctgagaccgtg
gatgatgcttttgctcgggccttaaaagtatggagcgacgtcactccactacgcttttct
cgaatccatgatggggaggctgacatcatgatcaactttggacgctgggagcatggagat
ggatacccatttgatggcaaggatggactcctggcacatgcctttgccccgggcactggt
gttgggggagattctcactttgatgatgatgaactgtggaccctgggagaaggacaagtg
gtccgagtaaagtatgggaacgctgacggcgagtactgcaagttccccttcctgtttaac
ggtcgggaatacagcagctgtacagacactggtcgcagtgatggcttcctctggtgctcc
accacatacaactttgagaaggatggcaagtatggcttctgcccccatgaagccttgttt
accatgggtggcaatgcagatggacagccctgcaagttcccgttccgcttccagggtacc
tcttacaacagctgtaccactgagggccgcaccgacggctaccgctggtgtggcaccacc
gaggactatgaccgggataagaagtatggattctgccccgagactgctatgtccactgtg
ggtggaaattcagaaggtgccccatgtgtcttccccttcactttcctgggcaacaagtat
gagagctgcaccagtgctggccgcaacgatggcaaggtgtggtgtgcgaccacaaccaac
tacgatgatgaccggaagtggggcttctgtcctgaccaaggatatagcctattcctcgtg
gcagcccatgagttcggccatgccatggggctggaacactctcaggaccctggagctctg
atggcccctatctacacctacaccaagaacttccgattatcccatgacgacatcaagggg
atccaggagctctatgggccctcccctgatgctgatactgacactggtactggccccaca
ccgacactgggacctgtcactccggagatctgcaaacaggacattgtttttgatggcatc
gctcagatccgtggtgagatcttcttcttcaaggaccggtttatttggcggacagtgaca
ccacgtgacaagcccacaggtcccttgttggtggccacattctggcctgagctcccagaa
aagattgacgctgtgtatgaggccccacaggaggagaaggctgtgttcttcgcagggaat
gagtactgggtctattctgccagcactctggagcgaggataccccaagccactgaccagc
ctggggttgccccctgatgtccagcaagtagatgctgcctttaactggagtaagaacaag
aagacatacatctttgcaggagacaagttctggagatacaatgaagtgaagaagaaaatg
gaccccggtttccctaagctcatcgcagactcctggaatgccatccctgataacctggat
gccgtcgtagacctgcaaggcggtggtcatagctacttcttcaagggtgcttattacctg
aagctggagaaccaaagtctgaagagtgtgaagtttggaagcatcaaatcagactggctg
ggctgctga
DBGET
integrated database retrieval system