Mus caroli (Ryukyu mouse): 110290055
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Entry
110290055 CDS
T05910
Symbol
Taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3 isoform X1
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110290055 (Taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110290055 (Taf3)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110290055 (Taf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_2
Motif
Other DBs
NCBI-GeneID:
110290055
NCBI-ProteinID:
XP_021012192
Ensembl:
MGP_CAROLIEiJ_G0023165
UniProt:
A0A6P5PAV6
LinkDB
All DBs
Position
2:complement(6438473..6580962)
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AA seq
931 aa
AA seq
DB search
MCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRDCHRYSELYGRTD
PILDDVGEAFQLMGVNLHELEDYIHNIEPVTFPHQIPSFPVSKNNVLQFPQPGSKDAEER
KDYIPDYLPPIVSSQEEEEEEQVPTDGGTSAEAMQVPLEEDDDMEEEEVINDENFLGKRP
LDSPEVEEMPSMKRPRLLSTKGDSLDVVLLEAREPLSSINPQKIPPMLSPVHVQDSTDLA
PPSPEPPMLAPFAKSQLPIAKPLETKSFTPKTKTKASSPGQKTKSPKAALSPARLGSPIR
SPKTIPKEKKSPGRSKSPKSPKSPKIVAHVPQTPVRPETPNRTPSAMVVEKTVKETIPVM
KPTQTPPEVVKLNIEMQPKKAVVTDKTIDDSIDAVIARACAEREPDPFEFSSGSESEGDT
FTSPKRILGSECTTPKASTSSNNFTKSLATPLPLSGGTSSSDNSWTMDASIDEVVRKAKL
GAPSNMPPTFPYISSPSISPPTPEPLHKGYEEKAKLPSSVDVKKKLKKELKTKLKKKEKQ
RDRERERERNKERSKEKDKMREREKEKEAGKELKYPWRELMKDEDSDPYKFKIKEFEDID
AKVRLKDGIVRREREKHKDKKKDRERSKREKDKRERERLKEKNREDKIKAPPTQLVLPPK
EMALPLFSPSAVRVPAMLPAFSPMLPEKLFEEKEKPKEKERKKDKKEKKKKKEKEKEKEK
KEREREKERREREKREKEKEKHKHEKIKVEPVIPAPSPVIPRLTLRVGAGQDKIVISKVV
PAPEAKPAPSLNRPKTPPPAPVPIPVRVSPTPLQPPLLTQAAVCPALMPSPAPALSGIGS
AKAPVRSVVTETVSTYVIRDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMA
APPEEMQWFCPKCANKIKKDKKHKKRKHRAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagagttactctaggtcgttgttgagggtctcggtggcgcagatctgccaggcg
ctgggctgggactcggtgcagctcagcgcctgccacctcctcaccgacgtcctgcagcgc
tatctgcagcagctgggccgggactgccatcggtactctgaactctatggccgaacagac
cccattttggatgatgttggtgaagccttccaacttatgggagttaatctgcatgaacta
gaagactatattcataatattgaacctgtcactttcccacatcaaattccttcatttcct
gttagcaagaacaatgtccttcagtttccccagcccggaagtaaagatgcagaggaaaga
aaagactacattccggattaccttccccccatcgtgtcttctcaagaagaggaggaagag
gaacaggtgcccactgatgggggcacctcagcagaagccatgcaggtgcccttggaagaa
gatgatgacatggaggaggaggaagtcatcaatgatgagaacttcttgggtaagagacca
ctggacagtcctgaagtggaagaaatgccctccatgaagcgcccacgactcctgagcact
aaaggggactccctagatgttgtgttgttagaagcacgagaacctctcagctccataaat
ccacagaagatcccaccaatgctttctcctgtgcatgtccaggacagtactgatctggcc
cctccatcaccagagccccccatgctggctccatttgcaaagtcacaactaccaattgca
aagccgttagaaacaaagtcgtttacaccaaaaacaaagactaaagctagctctccaggt
cagaaaactaagtcacccaaggctgccctatcaccagcaaggcttggaagtcctattcgg
tcaccaaaaaccatcccaaaagaaaagaagtcacccggacgctccaagagccccaagagt
cctaaaagccccaagattgtagctcatgttccccaaacccctgtcagacctgaaacacca
aataggaccccttcagctatggtggttgaaaaaacggttaaagagaccatcccagtgatg
aagccaacacagactcccccagaagttgtgaaactgaacattgaaatgcagccgaaaaag
gctgtggtgacagacaaaaccatcgatgactccatcgatgctgtgatcgcacgtgcctgt
gcagagcgggagccagaccctttcgagttttcttccggatcagaatcagaaggagacact
tttacaagtcctaagaggattttggggtcagagtgcaccactccaaaagcttccacttcc
tccaataacttcaccaagtccctggctactcctctgcctctctctggcggaacctcaagt
tcagataactcgtggacaatggatgcctctattgatgaggtggtgcggaaggcaaagctg
ggagccccttccaacatgcctcccaccttcccatatatctcttctccctcaatttctcct
cccactcctgaacctctacacaaggggtatgaggagaaagccaagctgccttcgtctgtg
gatgtaaagaaaaagttgaaaaaagaactgaagactaagttgaaaaagaaagaaaagcag
cgagacagagagagggagagagagagaaacaaagaaagaagcaaagagaaggataaaatg
agagagagggagaaggagaaggaggctggaaaggaacttaagtacccatggagggagctg
atgaaagacgaagattccgatccctataaatttaaaatcaaagaatttgaagacattgat
gcgaaagtgcgattgaaagatgggatcgtgaggagagagcgagagaagcataaggacaag
aagaaagatcgagaaagaagcaagcgggagaaagataagcgagaaagggaaaggcttaaa
gaaaaaaacagagaagacaagataaaggcccctccaacacagctggtgttgcccccaaaa
gaaatggcactgcctttgttcagcccttcagcagtgagggtcccggccatgctgccggcc
ttctcaccaatgctcccagaaaaactgtttgaggaaaaagagaagcccaaggagaaagaa
aggaaaaaggacaaaaaggagaagaagaagaagaaagagaaggagaaagaaaaggagaag
aaagagagggagagggagaaggagagaagggagagagagaagagagagaaggagaaggag
aagcacaaacatgagaagataaaagtggagcctgtcatccctgccccaagtccagttatc
cccaggttgactctgcgagttggcgctggccaggacaagattgtcatcagcaaagtggta
ccagccccggaggctaagcccgctccttctctgaacagacccaaaaccccacctccagcc
ccggtccctattcctgtgcgagtgagccctactcccctgcagccaccactcctcacccag
gctgcagtgtgcccagccctgatgccatccccagctcctgccctctctggaatagggagt
gccaaagcccccgtgaggagcgtcgtgacagagacggtcagcacttatgtgatccgtgat
gagtggggcaatcagatctggatctgtccagggtgcaacaagcctgatgatgggagcccg
atgattggctgtgacgactgtgacgattggtaccactggccctgtgtgggaatcatggct
gctcctccggaagagatgcagtggttctgcccgaagtgtgccaacaagataaagaaagac
aagaagcacaagaagaggaagcaccgtgcgcactga
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