Mus caroli (Ryukyu mouse): 110290783
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Entry
110290783 CDS
T05910
Gene name
Arnt
Definition
(RefSeq) aryl hydrocarbon receptor nuclear translocator isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04066
HIF-1 signaling pathway
mcal04934
Cushing syndrome
mcal05200
Pathways in cancer
mcal05204
Chemical carcinogenesis
mcal05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
110290783 (Arnt)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110290783 (Arnt)
05204 Chemical carcinogenesis
110290783 (Arnt)
09162 Cancer: specific types
05211 Renal cell carcinoma
110290783 (Arnt)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
110290783 (Arnt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110290783 (Arnt)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110290783 (Arnt)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
110290783
NCBI-ProteinID:
XP_021013185
Ensembl:
MGP_CAROLIEiJ_G0025343
UniProt:
A0A6P5PIT6
LinkDB
All DBs
Position
3
AA seq
790 aa
AA seq
DB search
MAATTANPEMTSDVPSLGPTIASGNPGPGIQGGGAVVQRAIKRRSGLDFDDEVEVNTKFL
RCDDDQMCNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCS
ALARKPDKLTILRMAVSHMKSLRGTGNTSTDGSYKPSFLTDQELKHLILEAADGFLFIVS
CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRVLDLK
TGTVKKEGQQSSMRMCMGSRRSFICRMRCGTSSVDPVSMNRLSFLRNRCRNGLGSVKEGE
PHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFCLVAIGRLQVTSSPNCTDMSNICQP
TEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKG
QVLSVMFRFRSKTREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQEPRPTLSNTIP
RSQLGPTANLSLEMGTGQLPSRQQQQQTELDMVPGRDGLASYNHSQVSVQPVASAGSEHS
KPLEKSEGLFAQDRDPRFPEIYPSITADQSKGISSSTVPATQQLFSQGSSFPPNPRPAEN
FRNSGLTPPVTIVQPSSSAGQILAQISRHSNPAQGSAPTWTSSSRPGFSAQQVPTQATAK
TRSSQFGVNNFQTSSSFSAMSLPGAPTASSGTAAYPALPNRGSNFPPETGQTTGQFQART
AEGVGVWPQWQGQQPHHRSSSSEQHVQQTQAQAPSQPEVFQEMLSMLGDQSNTYNNEEFP
DLTMFPPFSE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactacagctaacccagaaatgacatcagatgtaccatcgctgggtcccacc
attgcttctggaaaccctggacctgggattcaaggtggaggagctgttgtacagagggct
attaagcgacggtcagggctggattttgatgatgaagtagaagtgaacactaaatttttg
agatgcgatgatgaccagatgtgtaatgacaaagaacggtttgccaggtcggatgatgag
cagagctctgcggataaagagagacttgccagggaaaatcatagtgaaatagaacggcgg
cgacggaacaagatgacagcttacatcacagaactgtcagacatggtacctacctgtagt
gccctggctcgaaaaccagacaagctaaccatcttacgcatggccgtgtctcacatgaag
tccttgaggggaactggcaacacatctactgatggctcctacaagccatctttcctcact
gatcaggaactgaaacatttgatcttggaggcagcagatggctttctgtttattgtctcc
tgtgagactggacgggtggtgtatgtctctgactcagtgactcccgttttgaatcagcca
cagtctgaatggttcgggagcacactgtatgatcaggtgcacccagatgatgtggataaa
cttcgagagcagctctctacatcagaaaatgccctaacagggcgggtcctggatctgaag
actggaacagtgaaaaaggaaggccagcagtcttccatgaggatgtgcatgggctcacga
aggtcgttcatctgccgcatgaggtgtggcaccagctccgtggaccctgtttccatgaat
agactgagctttttgaggaacagatgcaggaatggacttggctctgtgaaggaaggagaa
cctcactttgtggtagtccactgcacaggctacatcaaggcctggccaccagcaggtgtc
tccctcccagatgatgacccggaggctggccaggggagcaaattctgcctagtggccatt
ggcaggctgcaggtaactagttctcccaactgtacagacatgagtaacatttgtcagcca
acagagttcatctcccgacacaacattgaagggatattcacttttgtagaccatcgttgt
gtggctactgttggctaccagccacaggagctcttagggaagaatattgtagaattttgt
catcctgaagaccaacaacttctaagagacagctttcagcaggtggtgaaattaaaaggc
caggtgctgtccgtcatgttccgattccgatctaagacccgagaatggctgtggatgaga
acgagctcctttaccttccaaaacccttattcagatgaaattgagtatattatctgcacc
aacaccaatgtgaagaactctagccaggaaccacggcctacactgtccaacaccattcca
aggtcacagctaggtccgacagccaatttatccctagagatgggtacagggcagctgcca
tccaggcagcagcagcagcaaacagaactggatatggtaccaggaagagatgggctggcc
agctataatcattcccaggtttctgtccagcctgtggcaagtgcaggatcagaacacagc
aagccccttgagaagtcagaaggtctctttgcacaggacagagatccaaggtttccagaa
atctatcccagcatcactgcagatcagagtaaaggcatctcctccagcactgtccctgcc
acccaacagctgttctcccagggcagctcattccctcctaacccccggccggcagagaat
ttcaggaatagtggtcttacccctcctgtaaccattgtccagccatcatcttctgcagga
cagatactggcccagatttcacgtcactccaaccctgcccagggatcagcgccgacctgg
acctctagctcccgcccaggcttctccgcccagcaggtgcccacccaggctacagccaag
actcgctcttcccaatttggtgtgaacaactttcagacttcttcttccttcagtgctatg
tctcttccgggtgctcccactgcctcatctggcactgctgcctaccctgctctccccaac
cgtggctccaactttcctcctgagactggacagaccacaggacagttccaggcccggacg
gcagagggcgtgggtgtctggccacagtggcagggccagcagccccatcatcggtctagt
tccagtgagcagcatgttcagcagacacaagcacaagcacctagccagcctgaggtcttt
caagaaatgctgtccatgctgggagaccaaagcaacacctacaacaatgaagaatttccc
gatctaactatgtttccccccttttccgaatag
Mus caroli (Ryukyu mouse): 110298280
Help
Entry
110298280 CDS
T05910
Gene name
Arnt2
Definition
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05200
Pathways in cancer
mcal05202
Transcriptional misregulation in cancer
mcal05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110298280 (Arnt2)
05202 Transcriptional misregulation in cancer
110298280 (Arnt2)
09162 Cancer: specific types
05211 Renal cell carcinoma
110298280 (Arnt2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110298280 (Arnt2)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110298280 (Arnt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
HLH
PAS_9
PAS_4
PAS_2
Motif
Other DBs
NCBI-GeneID:
110298280
NCBI-ProteinID:
XP_021023077
Ensembl:
MGP_CAROLIEiJ_G0029947
UniProt:
A0A6P5Q2Y7
LinkDB
All DBs
Position
7
AA seq
712 aa
AA seq
DB search
MATPAAVNPPEMASDIPGSVALPVAPMAATGQVRMAGAMPARGGKRRSGMDFDDEDGEGP
SKFSRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTG
NKSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFG
STLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICR
MRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGYIKAWPPAGMTIPEED
ADVGQGSKYCLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGY
QPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWLLIRTSSFTF
QNPYSDEIEYVICTNTNVKQLQQQQAELEVHQRDGLSSYDLSQVPVPNLPAGVHEAGKSV
EKADAIFSQERDPRFAEMFAGISASEKKMMSSASASGSQQIYSQGSPFPAGHSGKAFSSS
VVHVPGVNDIQSSSSTGQNISQISRQLNQGQVAWTGSRPPFPGQPSKTQSSAFGIGSSHP
YPADPSSYSPLSSPAASSPSGNAYPSLANRTPGFAESGQSGGQFQGRPSEVWSQWQSQHH
GQQSGEQHSHQQPGQTEVFQDMLPMPGDPTQGTGNYNIEDFADLGMFPPFSE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccggccgccgtcaaccctccggagatggcgtcagacataccaggatctgtg
gccttgcctgttgcccccatggcggccaccggacaggtgagaatggcaggggccatgcct
gcccgcggaggaaagcgtcgatccggaatggacttcgatgacgaagatggggaaggtccc
agtaaattctcaagagagaaccacagtgagattgagcggcgcaggcggaacaagatgact
caatatattacggaactttctgacatggttcccacctgcagtgcactggctaggaagcca
gacaagctgaccatcctgcgcatggcggtctcgcacatgaagtccatgaggggcactggc
aacaaatcgactgacggcgcatacaagccttccttcctcactgagcaggaactgaagcat
ctcatcctggaagccgctgatggatttctgtttgtggtggcagctgagacagggagagtc
atctatgtgtctgattcggtcactcctgtcctgaaccagccacagtcagagtggtttggg
agcacgctttatgagcaggtgcaccctgatgacgtggagaaactgagggaacagctgtgc
acttcagaaaactccatgacaggccgcatcctggacctgaagactgggacagtgaagaaa
gagggacagcagtcatccatgcgcatgtgtatgggctctcggcgctccttcatctgtagg
atgaggtgtggaaacgctcccttggaccacctgcctttgaacagaataaccaccatgagg
aaaaggttcaggaatggccttggccctgtgaaagaaggagaagcccagtatgctgtggtc
cactgcacaggttacatcaaggcttggccaccagcaggaatgaccatacccgaagaagac
gctgatgtcggacaaggcagtaaatattgcctcgtggcaattgggaggctccaggtgacc
agctctcctgtgtgcatggacatgagtggcatgtcagtgcccacagagttcctgtcacgg
cacaactctgatgggatcatcacatttgtggacccaagatgcatcagtgtgattggctac
cagccccaggaccttctgggaaaggatattttggaattttgccaccctgaggatcagagc
cacctacgggagagcttccagcaggtggttaagctgaagggccaagtgctgtcggtcatg
tatcggttccgcaccaagaaccgggagtggctgttgatccgtaccagcagcttcaccttc
cagaacccctactctgatgagatcgagtacgtcatctgcaccaacaccaatgtcaagcaa
cttcagcaacagcaggcagaactggaggtacatcagcgagatgggctgtcgtcatatgac
ttatctcaggtcccagtacccaacctacccgctggtgttcacgaggccgggaagtctgtg
gaaaaggcagatgcaatcttctcccaagagagagaccctcgttttgctgagatgtttgca
ggcatcagtgcatcggagaagaagatgatgagctcagcctcagcatcaggcagtcagcag
atctactcccaaggaagtccattccctgccgggcactcgggcaaggccttcagctcttcc
gtggtccatgtgcctggagtgaatgacattcagtcctcctcctcaacgggacagaacata
tcccagatctctcggcagctgaaccagggccaggtggcatggacaggcagccgtccaccg
ttcccagggcagcccagcaagacgcagtcatctgccttcggaattggatcaagccaccct
tacccagctgacccttcatcctacagtcctctctccagcccagctgcctcctcaccaagt
ggaaatgcataccctagtcttgccaacaggactccagggtttgctgagagtggacagagt
ggcgggcagttccagggccggccctcggaggtctggtcccagtggcagagccagcatcac
ggacagcagagcggtgagcagcactcacaccagcagcctggccagactgaagtgttccag
gacatgctacccatgccgggcgacccgacgcaggggactggcaactataacatcgaggac
tttgctgacctgggcatgttccctccattttctgagtag
DBGET
integrated database retrieval system
