Mus caroli (Ryukyu mouse): 110290898
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Entry
110290898 CDS
T05910
Symbol
Pogz
Name
(RefSeq) pogo transposable element with ZNF domain isoform X1
KO
K22594
pogo transposable element with ZNF domain
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110290898 (Pogz)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110290898 (Pogz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_1
HTH_Tnp_Tc5
zf-C2H2_4
HTH_28
HTH_23
Motif
Other DBs
NCBI-GeneID:
110290898
NCBI-ProteinID:
XP_021013437
Ensembl:
MGP_CAROLIEiJ_G0025319
UniProt:
A0A6P5PJG1
LinkDB
All DBs
Position
3:88905404..88966244
Genome browser
AA seq
1409 aa
AA seq
DB search
MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTTSVSVSQQPVSAPVPIAAHAS
VAGHLSTSTTVSSSGAQNSDSTKKTLVTLIANNNAGNTLVQQGGQPLILTQNPAPGLGTM
VTQPVLRPVQVMQNANHVTSSPVASQPIFITTQGFPVRNVRPVQNAMNQVGIVLNVQQGQ
TVRPITLVPAPGTQFVKPTVGVPQVFSQMTPVRPGSTMPVRPTTNTFTTVIPATLTIRST
VPQSQSQQTKSTPSTSTTPTATQPTSLGQLAGQPPGQSNQTSNPKLAPSFPSPPAVSIAS
FVTVKRPGVTGENSNEVAKLVNTLNTVPSLGQSPGPVVVSNNSSAQRTSGPESSVKVTSS
IPVFDLQDGGRKICPRCNAQFRVTEALRGHMCYCCPEMVEYQKKGKSLDAEPSVPSAAKP
SSPEKTAPVTSTPSSTPIPALSPPTKVPEPNENAGDAVQTKLIMLVDDFYYGRDGGKAAQ
LTSFPKVATSFRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDGHTICQHCYRQFSTPF
QLQCHLENVHSPYESTTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYS
EVDVHFRMIHEDTRHLLCPYCLKVFKNGNAFQQHYMRHQKRNVYHCNKCRLQFLFAKDKI
EHKLQHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTVPVSSNDAPSGTLQEAAALTSTDP
LPVFLYPPVQRNIQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSR
AYANHMINNHVPRKSPKYLALFKNSVSGIKLACTSCTFATSVGDAMAKHLVFNPSHRSSN
ILPRGLSWMSHLRPGQAPERVLDWSMKNTYLPPPLVPNKAATVKPVGVTPAEPQELAGPV
LQALPSPASTATPPATPTHPQPSALPPSATEGTECLNVSEQEEGSPVTQDPEPASGGGGG
SGVGKKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQRRIRRWLRRFQASQGENLEGKYLS
FEAEEKLAEWVLIQREQQLPVNEETLFQKATKIGRSLEGGFKISYEWAVRFMLRHHLTPH
ARRAVAHTLPKHVAENAGLFIEFVQRQIHNQDLPLSMIVAIDEISLFLDTEVLSSDDRKE
NALQTVGTGEPWCDVVLSILADGTVLPTLVFFRGQANRLANVPDSILLEAKDSGYSDDEI
MELWSTRVWKKHTACQHSKSMLVMDCHRTHLSEEVLALLSASSTLPAVVPAGCSSKIQPL
DVCIKRTVKNFLHKKWKEQAREMADAACDSDVLLQLVLVWLGEVLGVIGDSPELVQRSFL
VASVLPGPDGNVNSPTRNADMQEELIASLEEQLKLNGEQSEEHSASAPRPRSSPEETVEP
ESLHQLFEGESETESFYGFEEADLDLMEI
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgacctgtttatggaatgtgaggaggaggaactggagccatggcagaaa
atcagtgatgtcattgaggactctgtagttgaagattacaattctgtggataaaactact
tccgtttctgtgagccagcagccagtctcagctccagtgcccattgctgcccatgcttct
gttgctgggcacctctctacatccactactgttagtagcagtggggcacagaacagcgac
agtacaaagaagactcttgtcacactaattgccaacaacaatgctggtaatactttggtc
cagcaaggtggacagccactcatcctcacccaaaacccagcaccaggtctgggaacaatg
gttactcaaccagtattgagacctgtccaggtcatgcagaatgccaatcatgtgactagc
tcccctgtggcctcacaacctatcttcatcactacccagggatttcctgtaaggaatgtt
cggcctgtacaaaatgcaatgaatcaggttgggattgtgctgaacgtacagcaaggccaa
acagttagaccgattacattggtcccagccccaggtacacagtttgttaagccgacagtt
ggcgtcccacaagtgttctctcagatgacccccgtgaggccaggctccacaatgcctgtg
aggcccaccaccaacacctttaccaccgtcatcccagctactctcaccatccgaagcact
gtcccacaatcacagtcccagcagaccaagtccacccccagtacctccactactcccact
gccacacagccaacctcactggggcagctagctggtcagcctccaggccagtccaaccag
acctcgaatcccaaactagctccctccttcccctctccacctgcagtgagcattgccagc
tttgtcactgtgaagcgacctggggttacaggtgaaaatagcaacgaagtggccaaattg
gtgaatactcttaacactgtcccttccctgggccagagtcctgggcccgtggtggtgtcc
aacaacagttctgctcaaagaaccagtggacctgaatcttcagtgaaagtgacctcttcc
atcccagtgtttgacctccaggacggtggacggaaaatatgtccacggtgtaatgcccag
ttccgtgttactgaagctttgagaggtcacatgtgttactgctgccctgaaatggttgag
taccaaaagaaaggcaagtccctcgatgcagagcccagtgtcccatcggcagcaaagccc
tcgtcccctgagaagacagcccctgttacttccacaccctcctctacaccaattcctgct
ctctcaccacctaccaaagtaccagagccaaatgagaatgctggagatgctgtccagacc
aagcttattatgctggtcgatgatttctactacggacgggatgggggcaaagcagcccag
ctcacgagctttcctaaggttgccacgtctttccgatgccctcattgtactaagaggcta
aagaacaacattcgattcatgaaccacatgaagcaccacgtagaacttgatcaacagaat
ggtgaggtggatggtcacactatctgccagcactgttaccgccagttttccacccctttc
cagctccagtgccacttggaaaatgttcatagtccctatgaatctactaccaagtgcaag
atctgtgagtgggcctttgaaagtgagcccttgttcctccagcatatgaaggacacgcac
aagcctggagagatgccttatgtttgtcaggtgtgtcagtatcgctcctccctctactct
gaggtagatgtccattttcggatgatccatgaagatactcggcatttgctttgcccgtat
tgcctaaaagtcttcaaaaatggcaatgccttccagcaacactacatgaggcaccagaag
agaaatgtttatcactgcaacaaatgccggctgcagtttctctttgccaaggacaaaatt
gaacacaagctgcagcaccataaaaccttccgtaagcctaagcaactggaaggcttgaaa
ccaggcaccaaggtgacaatccgggcttcccgggggcagccgagaactgttcctgtgtct
tcaaatgatgcaccttctggcaccttgcaggaggcagcagcgctgacctccactgacccc
ctacctgtcttcctttatccccctgtccagcgcaatatccagaagagagctgttaggaaa
atgagcgtcatgggccggcagacatgtctggagtgcagctttgagattccagatttccct
aatcatttccctacctatgtgcattgttctctctgtcgctacagcacctgctgctctaga
gcttatgccaatcacatgattaacaatcatgttccacggaaaagtcccaagtatttggct
ttgtttaaaaattctgtaagtggaatcaagctggcctgcacttcgtgtacctttgctacc
tccgtgggagatgccatggccaagcatttagtgttcaacccctcccacagatctagcaac
atcttaccacgggggctcagttggatgtctcacttaaggcctggccaggctcctgaacga
gtgttggactggagcatgaagaatacatatcttccacctcccctcgtccctaacaaagct
gccactgtgaagcctgtaggagtcaccccagcggagccccaagagctggcaggtcctgtg
ctccaggcacttccatccccagcctcaactgcaaccccaccagcaacccccactcaccca
cagccctccgccctgccaccctcggccacagaggggactgagtgtctgaatgtcagtgaa
caggaagaaggaagccctgtcacccaggatcctgagccagcatcaggtggtggaggtggc
agtggggttggcaagaaagagcagctgtccgtgaagaagcttcgggtagtactgtttgcc
ctgtgctgcaacaccgaacaggcggctgaacactttcgaaacccccagcggcgaatccgt
cgttggcttcgacgcttccaagcctctcagggagagaacttagagggcaaatatctcagc
tttgaggcagaagaaaaactggctgaatgggtgctgatccagagagagcagcagctccct
gtaaatgaggagaccttgtttcagaaagccaccaaaattggacgctctttggaagggggg
tttaagatctcctatgagtgggctgtgcgcttcatgcttcggcaccacctcactccccat
gcccggcgagctgtcgcccacacgttaccgaagcatgtagcagaaaatgctggactcttc
attgagtttgtgcagcggcagattcacaatcaggacttacctttgtctatgattgtggct
attgatgagatctctttgttcctggacacagaggtgctgagcagtgatgaccgaaaggag
aacgctcttcagacagtgggcacaggggagccttggtgtgacgtcgtgctgtctatccta
gcagatggcactgtcctccccacccttgttttcttccgaggacaagcaaatcggctcgct
aatgtgccagactctatattactagaggccaaagacagtggctacagtgacgacgaaatc
atggagctttggtcgacccgtgtatggaagaagcacacagcttgtcagcacagcaaaagc
atgttagtgatggactgtcatcgcactcacttgtcagaagaagtactggccctgctcagt
gcctctagcactttgcctgcggtggtccccgccggttgtagctccaaaatccagccacta
gatgtatgcatcaaacgaactgttaagaacttcctgcacaaaaagtggaaggaacaggct
cgggaaatggctgatgctgcttgtgattctgatgtcttgcttcagctggtgttggtctgg
ctaggtgaggtgctgggtgtcattggggactccccagagctagttcagcggtccttcctt
gtggctagtgttctgccaggtcccgatggcaacgttaactcacccacacgcaacgctgac
atgcaggaggagctcattgcttccctagaggagcagctaaagctaaatggagaacagtct
gaggagcactcggcttctgccccccgacccaggtcatctcctgaagagacagtcgagcct
gaaagccttcaccagctttttgagggggaaagtgagacggagtctttctatggctttgag
gaagctgaccttgatctgatggagatctag
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