KEGG   Mus caroli (Ryukyu mouse): 110291570
Entry
110291570         CDS       T05910                                 
Symbol
Ccnt2
Name
(RefSeq) cyclin-T2 isoform X1
  KO
K15188  cyclin T
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03250  Viral life cycle - HIV-1
mcal05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110291570 (Ccnt2)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    110291570 (Ccnt2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcal03021]
    110291570 (Ccnt2)
Transcription machinery [BR:mcal03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     110291570 (Ccnt2)
    Brd4/P-TEFb complex
     110291570 (Ccnt2)
    7SK RNP complex
     110291570 (Ccnt2)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N TFIIB
Other DBs
NCBI-GeneID: 110291570
NCBI-ProteinID: XP_021014446
Ensembl: MGP_CAROLIEiJ_G0014539
UniProt: A0A6P5PIP9
LinkDB
Position
1:119472431..119504601
AA seq 723 aa
MASGRGASSRWFFTREQLENTPSRRCGVEADEELSHRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMHHSFTKFNRNIISPTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDT
KCDAYLQQTQELVLLETIMLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNS
LHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEF
LQILEKTPSRLKRIRNWRAMAKKPKVDGQVSETPLLGSSLVQNSMLVDSVTGVPANPSFQ
KPSTSTFPAPIPLNSGTTSVQDSRASDNLSVLAAGMPSTSYSLSSHQEWPQHPDSARTDP
VYTQKQEATLSGSQYISFQQGPSMALHSGLHHRPDKVADHSSAKQEYTHKAGSSKHHGPI
PATPGVLPQKMSLDKYREKRKLETLDMDTRDHYIAAHAEQQHKHGPAQAVTGTSVTSPIK
MKLPLTNSDKPEKHLAEKKERSGSLKLRIPIPPPDKGPSKEELKMKIKVASSERHSSSDE
GSGKSKHSSPHISRDHKEKHKEHPANRHHSSHKYLHMHSGGSKHAADGMPPTVLRSPVGL
GPEGISSASSARKKLHISEASHNHHSKMSKSSKSSGSSSSSSSVKQYLSSHSSVFNHPLP
PPPPVTYQVGYGHLSTLVKLDKKPVEPHGPEANHEYSTSSQHMDYKDTFDMLDSLLSAQG
MNM
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggcgtcgggccgtggagcttcttctcgctggttctttactcgggaacagctggagaac
acgccgagccgccgctgcggagtagaagcggatgaagagctgtcgcatcgccagcaggcg
gccaacctcatccaggacatgggacaacgtctcaatgtctctcagcttacaataaacact
gcgattgtttatatgcacaggttttatatgcaccattccttcaccaaattcaacagaaat
ataatatcacctactgcattgtttttggctgcaaaagtggaagagcaggctcgaaagctt
gaacatgttatcaaagtagcacacgcttgtcttcatcccctagagccactcctggacaca
aaatgtgatgcttatcttcagcagactcaagaactggttttacttgaaaccataatgcta
caaacactgggttttgagatcaccattgaacacccacacacagatgtggtgaaatgcacc
cagttagtaagagcaagcaaggatttggcacagacatcctatttcatggctaccaacagt
ttgcatcttacgaccttctgtcttcagtacaaacccacagtgatagcatgtgtatgcatt
catttggcttgcaaatggtccaattgggagattcctgtgtcaacagatggaaagcactgg
tgggaatatgtggaccctacggttaccctagagctgctagatgaactaacacatgagttt
ctacaaatattggagaaaacgcctagtaggttgaagaggattcgaaactggagggctatg
gctaagaaaccaaaagtagatggacaagtatcagagacaccactgcttggttcatctttg
gtccagaattctatgttagtagatagtgtcactggtgtacctgccaacccaagctttcag
aaaccatcaacatcaacgttccctgctccaatacctctaaattcaggaactacttctgtt
caagatagccgtgcatctgataatttatcagtgctagcagcaggaatgcccagtacctca
tacagtttgtcatcacaccaagagtggcctcagcatccagattcagccaggacagaccca
gtgtacacacagaaacaggaggccactctctctgggagccagtacataagcttccagcag
ggaccttcaatggcactgcattccggattacatcacaggccggacaaagttgctgatcat
tcatcagctaagcaagaatatactcacaaagctgggagcagtaaacaccatggtcccata
cctgctactcctggagtgcttcctcagaaaatgtctttagataagtacagagaaaagcgg
aagctggaaacccttgacatggacacaagggatcactatatagctgcccatgcagaacag
cagcacaagcatgggccggctcaggcagtcacaggcacttctgtcacttctcccatcaaa
atgaagcttcccctcaccaactcggacaagcctgagaaacacttggcagagaaaaaggag
aggagtggatcactgaagctccggattcccatccccccgcctgacaaaggtcccagcaaa
gaggagctgaagatgaaaatcaaagtggcatcctcggaaagacacagctcttctgatgaa
ggcagtgggaagagcaagcactcaagcccacacatcagcagagaccacaaggaaaagcac
aaggagcaccctgccaaccgccaccacagcagccacaagtatttgcacatgcacagtggg
ggcagtaagcatgccgccgatggaatgcctcccacggtgctcaggagtcctgtgggcctg
ggccctgaaggcatctcctccgcctccagtgcaaggaagaagttgcatatcagcgaagcc
tcccacaaccaccactccaaaatgagcaaaagttccaaaagttcaggtagttcatctagt
tcttcctctgttaagcagtatctatcctctcacagctctgtttttaaccatcccttaccc
cctcctccccctgtcacataccaggtgggctacggacatctcagcaccctcgtgaaactg
gacaagaaaccagtggagccccacggtcctgaggccaatcacgagtacagtacaagcagc
cagcatatggactacaaagacacattcgacatgctggactcgctgctaagtgcccaagga
atgaatatgtaa

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