Mus caroli (Ryukyu mouse): 110293818
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Entry
110293818 CDS
T05910
Symbol
Polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03020
RNA polymerase
mcal03420
Nucleotide excision repair
mcal05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110293818 (Polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
110293818 (Polr2b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110293818 (Polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110293818 (Polr2b)
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110293818 (Polr2b)
Enzymes [BR:
mcal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110293818 (Polr2b)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110293818 (Polr2b)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110293818 (Polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
110293818
NCBI-ProteinID:
XP_021017328
Ensembl:
MGP_CAROLIEiJ_G0027329
UniProt:
A0A6P5PQ98
LinkDB
All DBs
Position
5:70316581..70355467
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggacgaggacatgcaatatgatgaagatgatgatgaaatcactccagat
ttgtggcaggaagcatgctggatcgtaatcagttcttactttgatgagaaaggcttggtc
agacaacagctggattcctttgatgagtttattcagatgtctgttcaaagaattgtggag
gatgcaccaccgattgacctacaggccgaagctcagcacgctagtggagaagttgaagag
ccgccaagatatttactgaagtttgaacaaatttacctctccaaacctactcattgggaa
agagatggtgccccttcgccaatgatgccaaatgaagccaggttaagaaatctcacgtat
tctgctccgctttacgttgacataacaaagacagtcattaaagaaggtgaggagcagctg
cagactcagcaccagaagacgttcatagggaaaattccaattatgctgcgctccacctac
tgcctgttaaatggcttaacagaccgtgacctgtgtgagctgaatgagtgtcctttggat
cccggtggctattttattatcaatggatcagaaaaggttctgatagctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattccaagtacgcctatacaggagaa
tgtcgctcatgcctggagaattcttcccgacccaccagtactatatgggttagcatgctg
gccagaggaggacagggtgcaaagaagagtgctattggccaacgcatcgtggcaacatta
ccatacatcaagcaagaagttcctatcatcattgtgttcagagcactaggctttgtgtct
gatagagatattttagaacacatcatttatgacttcgaggatccagagatgatggaaatg
gttaaaccgtctctcgatgaagcgtttgtcatccaagagcagaatgttgccttaaacttc
atcggctcgagaggggcaaagcctggtgttactaaggagaaaagaattaaatatgcaaaa
gaagtcttacagaaagaaatgctccctcacgttggtgtcagtgatttctgtgagaccaaa
aaggcctatttcttggggtatatggttcataggttacttctagcagccctgggcagaaga
gaactagacgacagagatcactatggcaacaagagattggatcttgctgggcctctgctt
gcattcttatttagaggcatgtttaagaatttgctgaaagaagtacgaatctatgcgcag
aagtttattgatcgcggaaaggactttaacttagagctggcaatcaagacaaggatcata
tctgatgggctaaaatactctttagccactgggaactggggtgaccagaagaaagctcat
caagccagagctggagtgtcccaggtattgaaccgcctgacgtttgcatccactctttct
cacctgcgtcgtctaaactctcctattggcagagatggcaagctagcgaagcccagacag
ttgcataataccttgtggggaatggtgtgtcctgctgaaactccagagggccatgctgta
gggcttgtgaagaatttagccctgatggcttatatttcagttggatctcaaccctctcca
attttggaatttttagaagaatggagcatggaaaatttagaagaaatttcccctgcagct
attgctgatgcaaccaagatttttgttaatggctgctgggttggaatccataaagacccc
gaacaactcatgaacacactaaggaagttacgacggcagatggacatcatcgtatctgaa
gtttctatgatcagagatattcgagagcgggagattcggatctatacagacgcagggcgt
atttgtagaccccttctgattgtggaaaagcaaaagctgcttttgaagaagagacacatt
gaccagttgaaagagagagaatataacaactacagttggcaggatctggtagccagtggg
gtagtagagtatattgataccctggaagaggagaccgtgatgcttgcaatgactccagat
gatttgcaggagaaggaagtagcttattgttccacctacacccactgtgagattcaccca
tcaatgattcttggagtctgtgcatctattattccttttcctgatcataaccagtcccct
agaaacacataccagtctgctatgggcaagcaggccatgggagtttatatcaccaacttc
catgtgcggatggacaccttggcccatgttctctactatcctcagaaaccccttgtgact
acacggtctatggaatatctacgattcagagagctgccagcaggaatcaactcaattgtg
gccattgcatcctacacgggctataaccaagaagactctgttatcatgaatcgttcagct
gtggatcgaggctttttcaggtctgttttctaccgatcatacaaagaacaagagtctaaa
aaaggatttgatcaagaagaagtgtttgagaaacctacacgtgaaacatgccagggaatg
aggcatgccatctatgacaagttggatgatgacggtttgatagctccgggggttcgagtc
tccggagatgatgttattataggcaagacagtcaccttacctgagaacgaggatgagctg
gagagcaccaacaggcgctacaccaagagggactgcagcactttcctcagaactagtgag
acgggcattgtggaccaggtcatggtcactctcaaccaggaaggatataaattttgtaaa
ataagggtacgctctgttagaatcccgcagattggagacaagtttgctagccgacatggt
cagaagggtacttgtggtattcagtatagacaagaggacatgccattcacttgcgaaggc
ataactcctgacatcatcatcaacccccacgccatcccctcccggatgacaattggtcac
ttgatcgaatgtctccaagggaaggtctctgccaacaagggtgaaattggtgacgctact
ccatttaatgatgctgtcaatgtgcagaagatttctaatcttttgtctgactatggctac
catctcagagggaacgaggtgctctacaatggattcactggacgaaaaatcacatcacag
atttttattggccccacttactaccagcgtttgaagcatatggtggatgacaaaattcat
tctcgtgctaggggacccattcagattcttaacagacagcccatggagggcagatctcgt
gatggtggcctgcgcttcggagaaatggaacgagactgtcagattgcccacggggcagca
cagtttttaagagaaaggctgtttgaagcatcagatccgtatcaggttcacgtctgtaat
ctttgtggaataatggcaattgctaacacgaggactcatacatatgagtgcaggggatgc
cgcaataaaacccagatttctttggtacgaatgccgtatgcgtgcaagctgttgttccag
gagctcatgtccatgagcatcgcaccacgaatgatgagtgtttag
DBGET
integrated database retrieval system
