Mus caroli (Ryukyu mouse): 110294031
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Entry
110294031 CDS
T05910
Gene name
Scarb1
Definition
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04145
Phagosome
mcal04913
Ovarian steroidogenesis
mcal04925
Aldosterone synthesis and secretion
mcal04927
Cortisol synthesis and secretion
mcal04934
Cushing syndrome
mcal04975
Fat digestion and absorption
mcal04976
Bile secretion
mcal04977
Vitamin digestion and absorption
mcal04979
Cholesterol metabolism
mcal05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110294031 (Scarb1)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
110294031 (Scarb1)
04925 Aldosterone synthesis and secretion
110294031 (Scarb1)
04927 Cortisol synthesis and secretion
110294031 (Scarb1)
09154 Digestive system
04976 Bile secretion
110294031 (Scarb1)
04975 Fat digestion and absorption
110294031 (Scarb1)
04979 Cholesterol metabolism
110294031 (Scarb1)
04977 Vitamin digestion and absorption
110294031 (Scarb1)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
110294031 (Scarb1)
09172 Infectious disease: viral
05160 Hepatitis C
110294031 (Scarb1)
Membrane trafficking [BR:
mcal04131
]
Endocytosis
Phagocytosis
Scavenger receptors
110294031 (Scarb1)
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110294031 (Scarb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD36
PorA
Motif
Other DBs
NCBI-GeneID:
110294031
NCBI-ProteinID:
XP_021017650
Ensembl:
MGP_CAROLIEiJ_G0027764
UniProt:
A0A6P5PNC7
LinkDB
All DBs
Position
5
AA seq
521 aa
AA seq
DB search
MGGSSRARWVALGLGALGLLFAALGVVMILMVPSLIKQQVLKNVRIDPSSLSFGMWKEIP
VPFYLSVYFFEVVNPNEVLNGQKPVVRERGPYVYREFRQKVNITFNDNDTVSFVENRSLH
FQPDKSQGSESDYIILPNILVLGGSILMENKPASLKLMMTLGLVTMGQRAFMNRTVGEIL
WGYDDPFVNFLNTYLPDMLPIKGKFGLFVGMNNSNSGVFTVFTGVQNFSRIHLVDKWNGL
SKIDYWHSEQCNMINGTSGQMWAPFMTPESSLEFFSPEACRSMKLTYNESRVFEGIPTYR
FTAPDTLFANGSVYPPNEGFCPCRESGIQNVSTCRFGAPLFLSHPHFYNADPVLSEAVLG
LNPNPKEHSLFLDIHPVTGIPMNCSVKMQLSLYIKSVKGIGQTGKIEPVVLPLLWFEQSG
AMGGKPLSTFYTQLVLMPQVLHYAQYVLLGLGGLLLLVPIICQLRSQVSRGGHALDSDSA
RVSASLRFLQLALVLPPQSHPAVTFLYKSWKAQDPPRSGLG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcagctccagggcgcgctgggtggccttggggttgggcgccctggggctgctg
tttgctgcgctcggcgttgtcatgatcctcatggtgccctcgctcatcaagcagcaggtg
ctcaagaatgtccgcatagacccgagcagcctgtccttcgggatgtggaaggagatccct
gtccctttctacttgtctgtctacttcttcgaagtggtcaacccaaacgaggtcctcaac
ggccagaagccagtagtccgggagcgtggaccctatgtctacagggagttcagacaaaag
gttaacatcaccttcaatgacaacgacaccgtgtccttcgtggagaaccgcagcctccat
ttccagcctgacaagtcgcagggctcagagagtgactacattatactgcctaacatcttg
gtcctggggggctcgatattgatggagaacaagcctgcgagcctgaagttgatgatgacc
ttggggctggtcaccatgggccagcgtgcttttatgaaccgcacggttggtgagatcctg
tggggctatgacgatcccttcgtgaattttctcaacacatacctcccagacatgcttccc
ataaagggcaaatttggcctgtttgttgggatgaacaactcaaattctggggtcttcact
gtcttcacgggcgtccagaatttcagcaggatccatctggtggacaaatggaacggactc
agcaagatcgattattggcattcggaacagtgtaacatgatcaatgggacttccgggcag
atgtgggcacccttcatgacacccgaatcctcgctggaattcttcagcccggaggcatgc
aggtccatgaagctgacctacaacgaatcaagggtgtttgaaggcattcccacgtatcgc
ttcacggcccccgatactctgtttgccaacgggtccgtctacccacccaacgaaggcttc
tgcccatgccgcgagtctggcattcagaatgtcagcacctgcaggtttggtgcgcctctg
tttctctcccacccgcacttttacaacgccgaccctgtgctgtcagaagctgttcttggt
ctgaaccctaacccaaaggagcactccttgttcctagatatccatccggtcactgggatc
cccatgaactgttctgtgaagatgcagctgagcctctacatcaaatctgtcaagggcatc
gggcaaacagggaagatcgagccagtagttctaccgttgttgtggtttgaacagagcgga
gcaatgggtggcaagcccctgagcacgttctacacgcagctggtgctgatgccccaggtt
cttcactacgcgcagtatgtgctgctggggcttggaggtctccttttgctggtgcccatc
atctgccaactgcgcagccaggtaagtaggggcggccacgccttggactcggactcggct
cgggtttcagccagcctccgtttcctgcagctagctcttgttctacctcctcaatcgcac
cctgcagtaacttttctctacaagtcctggaaggcccaggaccctcccaggtcggggcta
ggatga
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