Mus caroli (Ryukyu mouse): 110295796
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Entry
110295796 CDS
T05910
Gene name
Chd4
Definition
(RefSeq) chromodomain-helicase-DNA-binding protein 4
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:
3.6.4.12
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05165
Human papillomavirus infection
mcal05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110295796 (Chd4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110295796 (Chd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110295796 (Chd4)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.12 DNA helicase
110295796 (Chd4)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110295796 (Chd4)
Chromatin remodeling factors
NuRD complex
110295796 (Chd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHDCT2
DUF1086
SNF2_N
CHDNT
DUF1087
PHD
Helicase_C
HDA2-3
PHD_2
HMG_box
ResIII
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
110295796
NCBI-ProteinID:
XP_021019840
Ensembl:
MGP_CAROLIEiJ_G0028869
UniProt:
A0A6P5PU75
LinkDB
All DBs
Position
6
AA seq
1567 aa
AA seq
DB search
MASGLGSPSPCSAGSEEEDMDALLNNSLPPPHPENEEDPDEDLSEAETPKLKKKKKPKKP
RDPKIPKSKRQKKELGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKK
SKSKRKEEEEEEDEDDDSKEPKSSAQLLEDWGMEDIDHVFSEEDYRTLTNYKAFSQFVRP
LIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMVTATEVA
PPPPPVEVPIRKAKTKEGKGPNARRKPKGSPRVPDAKKPKPKKVAPLKIKLGGFGSKRKR
SSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTAKKKKKGEEEVTAVDGYET
DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDN
SEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGE
WLCPRCTKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNG
YSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLG
PHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNV
VMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI
FSQMTKMLDLLEDFLEHEGYKYERXDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK
MMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDD
KAIERLLDRNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDP
DYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASE
EGDEDFDERSEAPRRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRY
GMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLIRKKVQEFEHVNGRWSMPELAEVEENKKMSQPGSPSPKTPTPSTPGDTQP
NTPAPVPPAEDGIKIEENSLKEEESTEGEKEVKSTAPEATVECAQPPAPAPAPATAPEDD
KAPAEPPEGEEKVEKAEVKERTEEPMETEPKGTTEVEKVEEKSAVDLTPIVVEDKEEKKE
EEEKKEVMLQNGETPKDLSDEKQKKNIKQRFMFNIADGGFTELHSLWQNEERAATVTKKT
XEIWHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARR
FKLLEQALVIEEQLRRAAYLNMSEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNKP
ANAVLHKVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEPPP
QQVAQQQ
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcctgggctccccgtccccctgctcagcgggcagtgaggaggaggatatg
gacgcacttctgaacaacagcctgcccccaccccatccagaaaatgaggaagacccagac
gaggatctatccgaagcagagactccaaagctcaagaagaagaaaaagcctaagaaacct
cgagaccctaaaatccctaagagcaagcgccaaaaaaaggagctgggggacagctctggg
gaggggccagagtttgttgaggaggaggaagaggtggctctgcgctcagacagtgagggc
agcgactatactcctggcaagaagaagaaaaagaagctcggacctaagaaggagaagaag
agcaaatccaagcggaaggaggaggaggaagaggaggacgaggatgatgactcgaaggaa
cctaaatcatcagcccagcttttagaagactggggtatggaagacatcgaccatgtgttc
tcagaggaggattaccggaccctcaccaactacaaggccttcagccagtttgtcagaccg
ctgattgctgctaaaaaccccaagattgctgtctccaagatgatgatggtcttgggtgca
aagtggagggaattcagtaccaacaaccccttcaagggcagctcgggagcatcagtggca
gctgcagcggcagcggctgtggctgtggtggagagcatggtgacagctactgaagtcgcc
cctccccctcctcctgtggaggtgccgatccgcaaggccaagaccaaggagggcaaaggt
cccaatgctcggaggaagccgaaaggcagcccgcgagtgcctgacgccaagaagcccaaa
cccaagaaagtagctcctctgaagatcaagctgggagggttcggctccaagcggaagaga
tcctcgagtgaggatgacgatttagatgtagagtctgacttcgacgatgccagtatcaac
agctactctgtttcggacggttccaccagccgcagcagtcggagccgcaagaagctccgg
accgctaaaaagaaaaagaaaggcgaggaggaggtgactgctgtggatggttatgagaca
gaccaccaggactattgcgaggtgtgccagcaaggcggcgagatcatcctgtgtgacacc
tgtccccgagcctaccatatggtgtgcctggacccagacatggagaaggcccccgagggc
aagtggagctgcccgcactgtgagaaggagggaatccagtgggaagctaaggaggacaat
tctgagggtgaggagattctggaagaagtcgggggggacccagaagaggaggatgaccat
catatggaattctgtcgcgtctgcaaggacggcggggagctcctgtgctgtgacacctgc
ccttcttcctaccacatccactgcctgaaccccccgcttccagagatcccaaatggcgaa
tggctctgtccccgctgtactaaagaagcatcggtgaaattccatgtcctgctgacgtcc
tatgagttgatcaccattgatatggccatcttgggttctattgactgggcctgcctcatt
gtggatgaagcccatcggctgaagaacaaccagtctaagttcttccgagttttgaatggt
tactcgctgcagcacaagctgttgctaactggaactccgctacagaacaatctagaggaa
ctgtttcacctgctcaacttcctcacccctgagaggttccacaacttagaaggcttcttg
gaggagtttgcagacattgccaaagaggaccagattaaaaaactccacgacatgctgggg
cctcatatgttgcggcggctcaaagctgacgtcttcaagaatatgccatccaagacagag
ctgattgtgcgcgtggagttgagccctatgcagaagaagtactacaagtatattctcacg
cggaatttcgaagcactgaatgctcgaggtggtggcaaccaggtctctctgctgaatgtg
gtgatggatcttaagaagtgctgcaaccatccttacctcttccctgtggcagcaatggaa
gctcctaagatgcctaatggtatgtatgacggcagtgccctaatcagagcatctgggaag
ttgttgctgctgcagaagatgcttaagaacctgaaagagggagggcatcgtgtgctcatc
ttctcccagatgaccaagatgttggacttgctagaggattttttagaacatgaaggttat
aaatatgaacgtatngatggtggaatcactgggaacatgcgtcaggaggccattgatcgc
ttcaatgcaccgggtgctcaacagttctgcttcttgctttccactcgagctgggggcctt
gggatcaatctggccactgctgacacagttattatatatgactctgactggaacccccat
aatgacatccaggcctttagcagagcccaccgtattggncaaaataagaaggtgatgatc
taccggtttgtgacccgagcatcagtggaggagcgcatcacncaggtggcaaagaagaag
atgatgttgacacatttagtggtacggcctggtctgggctccaaaacaggctcaatgtcc
aaacaggagcttgatgatatcctcaaatttggcactgaggagctattcaaggatgaagcc
acggatggaggaggagacaacaaggagggagaagacagcagtgttatccattatgacgat
aaggccattgagcgactgctggatcgaaaccaggacgagactgaagacacagaattgcag
ggcatgaatgaatatttgagctcatttaaagtggctcagtatgtggtacgggaagaagag
atgggggaggaagaggaggtagaacgggaaatcataaaacaggaagaaagtgtggatcct
gactactgggagaaattgctgcggcaccattatgagcagcagcaagaagatctagcccga
aatctgggcaaaggaaaaagaatccgtaaacaggtcaactacaatgatggctcacaggag
gaccgagattggcaggacgaccagtccgacaaccagtccgattactcagtggcctcagag
gaaggtgatgaagactttgacgaacggtcagaagctccccgcaggcccagtcgcaagggc
ctgcggaatgataaagataagccattacctcctctgttggcccgtgttggtgggaatatt
gaagtacttggttttaatgctcgtcagcggaaagcatttcttaatgcaattatgcgatat
ggcatgccacctcaggatgcttttaccactcagtggcttgtgagagatcttcgaggcaag
tcagagaaagaatttaaggcttatgtgtcactcttcatgcgacatttgtgtgagcctggg
gcagatggggctgagacctttgctgatggtgtcccacgagaaggcctgtctcgtcaacat
gttctcactaggatcggtgtcatgtctctgattcgaaagaaggttcaggagtttgaacat
gtcaatggacgctggagcatgcccgaactggctgaagtagaggaaaacaaaaaaatgtct
cagccaggttcaccctctccaaagactcctacaccttccacaccaggggacacacaaccc
aatactcctgcgcctgtgccacctgctgaggatgggataaaaatagaggaaaatagcctt
aaagaagaagagagcacagaaggagagaaggaagttaaatctacagcccctgaggcgact
gtggagtgtgcacagccccctgcccctgcccctgcccctgccactgcccccgaggatgac
aaggctcctgccgagcctcctgagggggaggaaaaagtggaaaaggcagaggtgaaggag
agaacagaggagcctatggagacagagcccaaaggtactactgaggtggagaaagtggag
gagaagtctgcggtagacctgaccccgatcgtggtggaagacaaagaagagaagaaggag
gaggaagagaaaaaggaggtgatgcttcagaatggggaaacgcccaaggatcttagtgat
gagaagcagaagaaaaacatcaaacagcgtttcatgttcaacattgcagatggtggtttt
actgagttgcactcgctgtggcagaatgaagagcgggcagccacggtcaccaagaagact
tangagatctggcaccgtcgccatgattactggctgctggctggcattataaaccacggc
tatgcccggtggcaggacatccagaatgacccacggtatgccatcctcaatgagcctttc
aagggtgaaatgaatcgtggcaattttctagagatcaagaataaatttttagctcgaaga
ttcaagctcttagaacaagccctggtgatcgaggagcagcttcgcagggcagcttacctg
aacatgtccgaggacccctctcacccgtctatggcccttaacacccgctttgctgaggtg
gagtgtttggcagaaagtcaccagcacctgtccaaggagtcgatggcagggaataagccg
gccaatgcagtcctacacaaagtcctgaaacagctggaagaactgttgagtgacatgaaa
gctgatgtgacgcggctcccagccaccattgcccgcatccccccagtcgctgtgaggtta
cagatgtcagagcggaacattctcagccgcctggcaaacagggcgccagaacctccccca
cagcaggtagcccagcagcagtga
DBGET
integrated database retrieval system
