Mus caroli (Ryukyu mouse): 110296014 Help Entry 110296014         CDS       T05910                                  Symbol Col1a2 Name (RefSeq) collagen alpha-2(I) chain   KO K06236   collagen type I alpha Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04151   PI3K-Akt signaling pathway mcal04510   Focal adhesion mcal04512   ECM-receptor interaction mcal04611   Platelet activation mcal04820   Cytoskeleton in muscle cells mcal04926   Relaxin signaling pathway mcal04933   AGE-RAGE signaling pathway in diabetic complications mcal04974   Protein digestion and absorption mcal05146   Amoebiasis mcal05165   Human papillomavirus infection mcal05205   Proteoglycans in cancer mcal05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:mcal00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     110296014 (Col1a2)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110296014 (Col1a2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110296014 (Col1a2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     110296014 (Col1a2)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     110296014 (Col1a2)   09152 Endocrine system    04926 Relaxin signaling pathway     110296014 (Col1a2)   09154 Digestive system    04974 Protein digestion and absorption     110296014 (Col1a2)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     110296014 (Col1a2)   09172 Infectious disease: viral    05165 Human papillomavirus infection     110296014 (Col1a2)   09174 Infectious disease: parasitic    05146 Amoebiasis     110296014 (Col1a2)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     110296014 (Col1a2)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     110296014 (Col1a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mcal00536]     110296014 (Col1a2) Glycosaminoglycan binding proteins [BR:mcal00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110296014 (Col1a2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  110296014 NCBI-ProteinID:  XP_021020151 Ensembl:  MGP_CAROLIEiJ_G0028075 UniProt:  A0A6P5PPK1 LinkDB All DBs Position 6:984344..1019653 Genome browser AA seq 1372 aa AA seqDB search MLSFVDTRTLLLLAVTSCLATCQYLQSGSVRKGPTGDRGPRGQRGPAGPRGRDGVDGPMG PPGPPGSPGPPGPPAPPGLSGNFAAQYSDKGVSSGPGPMGLMGPRGPPGAVGAPGPQGFQ GPAGEPGEPGQTGPAGPRGPAGSPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLP GFKGVRGHSGMDGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGAR GSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPV GPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPAGAAGATGARGLVGEPGPAGSK GETGNKGEPGSVGAQGPPGPSGEEGKRGSPGEAGSAGPAGPPGLRGSPGSRGLPGADGRA GVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGID GRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGERGHPGLAGARGAPGPDGNNGAQGPP GPQGVQGGKGEQGPAGPPGFQGLPGPSGTTGEVGKPGERGLPGEFGLPGPAGPRGERGTP GESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGK GEKGETGLRGDTGNTGRDGARGVPGAVGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGER GEVGPAGPNGFAGPAGAAGQPGAKGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPV GNRGDGGPPGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGET GASGPPGFAGEKGPSGEPGTTGPPGTAGPQGLLGAPGILGLPGSRGERGLPGIAGALGEP GPLGISGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGSI GPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDK GHRGLPGLKGYSGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAGPSGPVGKDGRSGHPGPV GPAGVRGSQGSQGPAGPPGPPGPPGPPGVSGGGYDFGFEGDFYRADQPRSQPSLRPKDYE VDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWNSDYYWIDPNQGCTMDAIKVY CDFSTGETCIQAQPVNTPAKNSYSRAQANKHVWLGETINGGSQFEYNVEGVSSKEMATQL AFMRLLANRASQNITYHCKNSIAYLDEETGSLNKAVLLQGSNDVELVAEGNSRFTYSVLV DGCSKKTNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGADQEFRVEVGPVCFK NT seq 4119 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggatacgcggactctgttgctgcttgcagtaacttcctgcctagca acatgccaatatttgcaatcgggatctgtacgaaagggccccactggagacagaggacca cgtggacaaaggggccccgcaggtccccgaggcagagatggtgttgatggtcccatgggc cctcctggtccccctggttcccctggtcctcctggcccccctgccccccctggtctcagt gggaactttgctgctcagtattctgacaaaggagtttcgtctggccctggaccaatgggc ttaatgggacccagaggccctcctggtgctgttggagcccctggccctcaaggtttccaa ggacctgctggtgagcctggtgagcctggtcaaacgggtcctgcaggtccccgtggtcca gctggctctcctggcaaggctggtgaggatggtcaccctggaaaacccggaagacctggg gagagaggagtcgttggaccacagggtgctcgtggtttccccgggactcctggacttcct ggcttcaaaggcgtgagaggacacagtggtatggatggattgaagggacagcctggtgca cagggtgtgaagggtgaacccggtgcccctggagagaatggaactccaggtcaagcagga gcccgagggcttcctggcgagagagggcgtgtcggagctcctggtccagctggtgcccga ggcagtgacggaagcgttggccccgttggccctgctggtcccattgggtctgctggaccc cctggtttcccaggtgctcctggtcccaagggtgaacttgggcccgttggtaaccctggc cctgctggtcctgctggtccccgtggtgaagtgggtcttccaggtctttctggccctgtt ggacctcctggcaaccctggagcaaatgggctcactggcgccaagggtgctactggactc cctggtgttgctggggctcctggtctccctggcccccgtggtattcctggccccgctggt gctgctggtgctacgggtgccagaggacttgtcggtgagcctggtcctgctggctccaaa ggagagaccggtaacaagggtgagcctggctctgttggagcccaaggtcctcctggtccc agtggtgaagaaggaaagagagggtctcctggagaagctggatctgctggccctgcaggg cctccagggcttagaggcagccctggttctcgaggtcttcctggagctgatggcagagct ggtgtaatgggtccacctggcaatcgtggttcaacaggccctgctggagtccgaggtcct aatggagatgctggtcgccctggggaacctggtctcatgggacccagaggtcttcctggg tctcctggaaatgttggcccagctggtaaagaaggccctgtgggtctccctggcattgac ggcagacctggcccaatcggcccagctggaccaagaggtgaagctggcaacatcggattc cctggacccaaaggcccctctggtgatcctggcaaacctggtgagagaggccacccgggt cttgctggtgctcggggagctccaggacccgatggcaacaatggagctcagggcccccct ggaccccagggtgttcaaggtggcaaaggtgaacaaggccctgctggtcctcctggcttc cagggtctccctggtccctcaggtactactggagaagttggcaagcccggagaaaggggt cttcctggtgaattcggcctccctggtcctgctggtccaagaggagaacgtggtaccccg ggtgagagtggagctgctggcccttctggtcctattggaagccgaggtcccagcggagcc ccagggcctgatggaaacaagggtgaagctggtgcagtcggtgctccaggctctgctggt gcctctggtcctggtgggcttccaggagagaggggtgctgctggcatacctgggggcaaa ggagaaaagggtgaaactggtctccgaggtgacactggcaacactggtagagatggtgct cgtggtgttcctggtgctgtaggtgcccctggtcctgctggggcctcaggtgaccggggt gaagctggtgctgccggtccttctggcccagctggtcctcggggtagccctggtgaacgt ggtgaagttggccctgctggccccaatggatttgctggtcctgctggtgctgctggccaa cccggtgctaaaggagagaagggaaccaaagggcctaagggtgaaaatggcattgttggt ccaaccgggcctgttggagctgctggcccatctggtcctaatggcccacctggtcctgtt ggaaatcgtggtgatggagggccccctggtatgactggcttccctggtgctgctggacgg actggcccccccggacccagtggtattactggcccccctggcccccctggtgctgctgga aaagaagggattcgtggtccccgtggcgaccaaggtccagttggccgaactggagaaaca ggtgcatctggaccccctggatttgctggtgaaaagggtccctctggagaacctggtacc acaggaccccctggtaccgcaggtcctcagggtcttcttggtgctcccggtattctgggt ctccctggctctagaggtgaacgtggtctgccaggtattgctggtgctctgggtgaacct ggccctctgggcatctcaggccctcctggtgcccgtggtcccccgggtgctgtgggcagc cctggagttaatggcgcccctggtgaagctggtcgagatggtaaccctggcagcgatggt cccccaggtcgtgatggtcagcctggacacaagggagagcgtggttaccctggcagcatt ggtccgactggtgctgcaggtgcccctggtcctcacggttctgtgggtcctgctgggaaa catggaaaccgaggtgaacctggtcctgccggttctgttggtcctgttggtgctgttggt ccaagaggtcctagtggtcctcaaggcatccgaggtgacaaaggagagcctggtgataaa gggcacaggggtcttcctggcttaaaaggatacagtggattgcagggtcttcctggtctt gctggcctacatggtgaccaaggagctcctggtcctgtgggtcctgctggtcccaggggt cctgctgggccttctggccccgttggcaaagatggcagatctggacatcctggcccagtc gggcctgctggtgttcgtggttctcagggtagccaaggtcccgctggtccccctggtccc cctggacctcctggtcctcctggtgtcagcggaggtggctatgactttggttttgaagga gacttctacagggctgaccagcctcgctcacagccttcactcagacccaaggactatgaa gttgatgcaactctgaaatctctcaataaccagattgagacccttctcactcctgaaggc tctagaaagaaccctgctcgcacgtgccgggacttaagactcagccacccagagtggaac agcgattactactggattgaccctaaccaaggatgtactatggatgccatcaaagtgtac tgtgatttctctactggtgaaacctgcatccaggcccaacctgtaaacaccccagccaag aactcatacagccgcgcccaggccaacaagcatgtctggttaggagagactatcaatggt ggcagccagtttgaatacaacgtagaaggggtgtcctccaaggaaatggcaacccaactc gccttcatgcgcctgctggccaaccgtgcctctcagaacatcacctaccactgcaagaac agcattgcgtacctggatgaggagacgggcagcttgaacaaggctgtgcttctgcagggt tccaacgatgttgaacttgttgctgagggcaacagcaggttcacctactctgtcctagtc gatggctgctccaaaaagacaaatgaatggggcaagacaatcattgaatacaaaacaaat aagccatctcgcctgccgttccttgacattgcacctctggacattggtggtgctgaccaa gaattccgtgtggaggttggccccgtctgtttcaaataa

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