Mus caroli (Ryukyu mouse): 110296033
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Entry
110296033 CDS
T05910
Gene name
Mitf
Definition
(RefSeq) microphthalmia-associated transcription factor isoform X1
KO
K09455
microphthalmia-associated transcription factor
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04137
Mitophagy - animal
mcal04380
Osteoclast differentiation
mcal04916
Melanogenesis
mcal05200
Pathways in cancer
mcal05202
Transcriptional misregulation in cancer
mcal05218
Melanoma
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110296033 (Mitf)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
110296033 (Mitf)
09158 Development and regeneration
04380 Osteoclast differentiation
110296033 (Mitf)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110296033 (Mitf)
05202 Transcriptional misregulation in cancer
110296033 (Mitf)
09162 Cancer: specific types
05218 Melanoma
110296033 (Mitf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110296033 (Mitf)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
110296033 (Mitf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
DUF726
Motif
Other DBs
NCBI-GeneID:
110296033
NCBI-ProteinID:
XP_021020184
Ensembl:
MGP_CAROLIEiJ_G0028681
UniProt:
A0A6P5PWJ3
LinkDB
All DBs
Position
6
AA seq
526 aa
AA seq
DB search
MQSESGIVADFEVGEEFHEEPKTYYELKSQPLKSSSSAEHSGASKPPLSSSTMTSRILLR
QQLMREQMQEQERREQQQKLQAAQFMQQRVAVSQTPAINVSVPTTLPSATQVPMEVLKVQ
THLENPTKYHIQQAQRHQVKQYLSTTLANKHASQVLSSPCPNQPGDHAMPPVPGSSAPNS
PMAMLTLNSNCEKEAFYKFEEQSRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEE
ILGLMDPALQMANTLPVSGNLIDLYSSQGLPPPGLTISNSCPANLPNIKRELTACIFPTE
SEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDY
IRKLQREQQRAKDLENRQKKLEHANRHLLLRVQELEMQARAHGLSLIPSTGLCSPDLVNR
IIKQEPVLENCSQELVQHQADLTCTTTLDLTDGTITFTNNLGTMPESSPAYSIPRKMGSN
LEDILMDDALSPVGVTDPLLSSVSPGASKTSSRRSSMSAEETEHAC
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcngaatcgggaatcgtggcggatttcgaagtcggggaggagtttcacgaagaa
cccaaaacctattacgaactcaaaagtcaacctctgaagagcagcagttctgcagagcat
tctggggcctccaagcctccgttaagctcctccactatgacatcacgcatcttgctacgc
cagcaactcatgcgtgagcagatgcaggagcaggagcgcagggagcagcagcagaagctg
caggcagcccagttcatgcaacagagagtggccgtgagtcagacaccagccataaacgtc
agcgtgcccaccacccttccctctgccacccaggtgccgatggaagtccttaaggtgcag
acccacctggaaaaccccaccaagtaccacatacagcaagctcagaggcaccaggtaaag
cagtacctttctaccactttagcaaataaacatgccagccaagtcctgagctcaccatgt
ccaaaccagcctggcgaccatgccatgccaccagtgccggggagcagcgcacccaacagc
cctatggctatgctcactcttaactccaactgtgaaaaagaggcattttataagtttgag
gagcagagcagggcagagagtgagtgcccaggtatgaacacgcactctcgagcgtcgtgc
atgcagatggatgatgtaattgatgacatcatcagcctggaatcaagttataatgaagaa
attttgggcttgatggatccggccttgcaaatggcaaatacgttacctgtctctggaaac
ttgatcgacctctatagcagccagggcctgccgccgccaggccttaccatcagcaactcc
tgtccagccaaccttcccaacataaaaagggagctcacagcgtgtattttccccacagag
tctgaagcaagagcattggctaaagagaggcagaaaaaggacaatcacaacttgattgaa
cgaagaagaagatttaacataaacgaccgcattaaggagctaggtactttgatccccaag
tcaaatgatccagacatgcggtggaacaagggaaccattctcaaggcctctgtggactac
atccggaagttgcaacgggaacagcaacgagctaaggaccttgaaaaccggcagaagaag
ctggagcatgcgaaccggcacctgctgctcagagtacaggagctggagatgcaggctaga
gcacacggactttcccttatcccatccaccggtctctgctcgcctgatctggtgaatcgg
atcatcaagcaagaaccagttcttgagaactgcagccaggaacttgtacagcaccaggca
gacctgacgtgtacgacaactctggatctcacggacggtaccatcacctttaccaacaac
ctcggcaccatgccagagagcagcccggcctacagcatccccaggaagatgggctccaac
ttggaagacatcctgatggacgatgccctctcaccagttggtgtcaccgacccactgctg
tcatcagtgtctccaggagcttcaaaaacaagcagccggaggagcagtatgagcgcagaa
gaaacggagcatgcgtgttag
DBGET
integrated database retrieval system
