Mus caroli (Ryukyu mouse): 110296061
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Entry
110296061 CDS
T05910
Symbol
Sec13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal04141
Protein processing in endoplasmic reticulum
mcal04150
mTOR signaling pathway
mcal05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110296061 (Sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110296061 (Sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
110296061 (Sec13)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110296061 (Sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110296061 (Sec13)
04131 Membrane trafficking [BR:
mcal04131
]
110296061 (Sec13)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110296061 (Sec13)
Membrane trafficking [BR:
mcal04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
110296061 (Sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110296061 (Sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
110296061 (Sec13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
110296061
NCBI-ProteinID:
XP_021020239
Ensembl:
MGP_CAROLIEiJ_G0028740
UniProt:
A0A6P5PU33
LinkDB
All DBs
Position
6:complement(108835552..108848569)
Genome browser
AA seq
322 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSGSASITEGQQNEQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtatcagtaattaacactgtggacacctctcatgaggacatgattcatgatgcacag
atggactactacggtacccgcctagcaacctgctcctcggataggtccgtcaaaattttc
gatgtgcggaatggagggcagatcctcattgcagacctcagaggacatgaggggccagtg
tggcaagtggcctgggcccaccccatgtatggcaatatcctggcctcctgttcctatgac
cggaaagtcatcatctggaaggaggaaaacggcacttgggagaagacccatgagcactca
ggacacgactcctcagtgaactctgtttgctgggcccctcatgactatggcctgatcctg
gcctgtgggagttcagatggggccatctcactgctgacctatacaggggaaggccagtgg
gaagtgaagaagattaataatgctcacacgattggctgtaatgctgtcagttgggcccca
gcagttgtgcctggaagccttatagaccaaccatcagggcagaaacccaattacatcaag
aagtttgcatcaggtggctgtgacaacctcatcaagctatggagggaagaggaggatggc
cagtggaaggaggagcagaagctagaggcacacagcgactgggtccgagacgttgcctgg
gccccctccattggcttgcccaccagcaccattgccagctgctctcaggatggtcgagtg
tttatttggacctgtgacgatgcctcaggcaatatgtggtcacctaaactcctacacaag
ttcaatgatgttgtgtggcacgtgagctggtccatcactgccaacatcctggctgtgtca
ggtggagacaataaggtgaccctgtggaaagagtcggtggatggacagtgggtgtgcatc
agtgatgtcaacaagggccagggttctgggtcagcctccatcacagagggccaacagaac
gagcagtga
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integrated database retrieval system