KEGG   Mus caroli (Ryukyu mouse): 110296061
Entry
110296061         CDS       T05910                                 
Symbol
Sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03013  Nucleocytoplasmic transport
mcal04141  Protein processing in endoplasmic reticulum
mcal04150  mTOR signaling pathway
mcal05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110296061 (Sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110296061 (Sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    110296061 (Sec13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110296061 (Sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcal03019]
    110296061 (Sec13)
   04131 Membrane trafficking [BR:mcal04131]
    110296061 (Sec13)
Messenger RNA biogenesis [BR:mcal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110296061 (Sec13)
Membrane trafficking [BR:mcal04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    110296061 (Sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    110296061 (Sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    110296061 (Sec13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 110296061
NCBI-ProteinID: XP_021020239
Ensembl: MGP_CAROLIEiJ_G0028740
UniProt: A0A6P5PU33
LinkDB
Position
6:complement(108835552..108848569)
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSGSASITEGQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtatcagtaattaacactgtggacacctctcatgaggacatgattcatgatgcacag
atggactactacggtacccgcctagcaacctgctcctcggataggtccgtcaaaattttc
gatgtgcggaatggagggcagatcctcattgcagacctcagaggacatgaggggccagtg
tggcaagtggcctgggcccaccccatgtatggcaatatcctggcctcctgttcctatgac
cggaaagtcatcatctggaaggaggaaaacggcacttgggagaagacccatgagcactca
ggacacgactcctcagtgaactctgtttgctgggcccctcatgactatggcctgatcctg
gcctgtgggagttcagatggggccatctcactgctgacctatacaggggaaggccagtgg
gaagtgaagaagattaataatgctcacacgattggctgtaatgctgtcagttgggcccca
gcagttgtgcctggaagccttatagaccaaccatcagggcagaaacccaattacatcaag
aagtttgcatcaggtggctgtgacaacctcatcaagctatggagggaagaggaggatggc
cagtggaaggaggagcagaagctagaggcacacagcgactgggtccgagacgttgcctgg
gccccctccattggcttgcccaccagcaccattgccagctgctctcaggatggtcgagtg
tttatttggacctgtgacgatgcctcaggcaatatgtggtcacctaaactcctacacaag
ttcaatgatgttgtgtggcacgtgagctggtccatcactgccaacatcctggctgtgtca
ggtggagacaataaggtgaccctgtggaaagagtcggtggatggacagtgggtgtgcatc
agtgatgtcaacaagggccagggttctgggtcagcctccatcacagagggccaacagaac
gagcagtga

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