Mus caroli (Ryukyu mouse): 110296087
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Entry
110296087 CDS
T05910
Symbol
Znf398
Name
(RefSeq) zinc finger protein 398 isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110296087 (Znf398)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110296087 (Znf398)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110296087 (Znf398)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
KRAB
zf-C2H2_jaz
zf-Di19
zf-C2HC_2
zf-met
Zn-ribbon_8
zf-C2H2_6
Crescentin
CpXC
Elf1
zf-BED
Motif
Other DBs
NCBI-GeneID:
110296087
NCBI-ProteinID:
XP_021020281
Ensembl:
MGP_CAROLIEiJ_G0028328
UniProt:
A0A6P5PV54
LinkDB
All DBs
Position
6:42304020..42329957
Genome browser
AA seq
643 aa
AA seq
DB search
MAEATAAPTSEWDSECLTSLQPLPLPTPPAANEAHLQTAAISLWTVVAAVQAIERKVEVH
SRRLLHLEGRTGTAEKKLASCEKTVAELGNQLDGKWAVLGTLLQEYGLLQRRLENLENLL
RNRNFWILRLPPGIKGDVPKVPVAFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLI
SMDYAMNQPDVLSQIQPEGEHSTDDQPRPEASEIPADPSEEPGLSTSDILSWIKQEEEPQ
VGVSQESKESELYKGTYADEELVIKAEDLARASLCPEVPVAFSAPPPAAAKDAFSDIAFK
SQQCTPMAPFARTATDLPEASEGQVTFTQLGSYPLPPPVGEQVFSCHHCGKSLSQDMLMT
HQCGHAAEHPLTCAQCPKHFTPQADVGSTSQDHANETPPTCPHCARTFTHPSRLTYHLRV
HNSTERPFLCPDCPKRFADQARLTSHRRAHATERPFRCPQCGRSFSLKISLLLHQRGHAQ
ERPFSCPQCGIDFNGHSALIRHQMIHTGERPYPCTDCSKSFMRKEHLLNHRRLHTGERPF
QCPHCGKSFIRKHHLMKHQRIHTGERPYPCAVCGRSFRYKQTLKDHLRTGHSGGCAGDRD
PSVQPPDPPGPLLTALETSGLGVSTEGLESSQWYGEGSGGVVL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcgaccgccgctccgacttctgaatgggactcggaatgccttacatccctg
cagccccttcctcttcctacacctccagcagcaaatgaggcacatctgcagacggcagcc
atttccctgtggacagtggtggctgctgtgcaggccatagagaggaaagtggaggtccac
agccggcgactcctccacctagaaggcaggacagggacagcagagaagaaactagcaagc
tgtgaaaagacagtggcagagcttgggaaccagctggatggcaagtgggccgtgctgggg
accttgctgcaggagtatgggctgcttcagcggcggttggagaacttggagaacttgttg
agaaacaggaacttctggatcctgcggctgcccccaggtattaaaggagatgtcccaaag
gtgcctgtggccttcgatgacgtctccatctacttttccaccccagagtgggaaaaatta
gaagaatggcaaaaggaactttacaagaatatcatgaagggcaactacgagtctctcatc
tccatggattatgccatgaatcaacctgatgttttatctcagattcaaccagaaggagaa
cacagtacagatgaccagccaaggccagaagcaagtgagattcctgcagaccccagtgaa
gagcctggcctttcaacctcagatattctgtcttggattaaacaagaggaagaacctcag
gttggagtctcccaggagtctaaagagagtgagctgtacaaaggtacctatgctgatgaa
gaacttgtcattaaagctgaagaccttgctagagcttccttgtgtcctgaagttccagta
gccttctctgctccaccaccagcagcagccaaggatgcattttcagatatagctttcaaa
agccagcagtgtacacccatggcaccttttgcacgaacggccactgacctgcctgaagct
tcagagggacaagtgacttttactcagttaggaagttacccactcccacctccagttgga
gagcaggttttctcatgccaccattgtggcaagagtctcagtcaagacatgttaatgaca
catcagtgtggccatgctgctgaacaccccttaacctgtgcccagtgtcctaagcacttc
accccacaagcagatgttggtagcacctcccaggatcatgccaatgaaacacctcccacc
tgccctcactgcgcccggacattcactcacccctcacgactcacataccaccttcgagta
cacaacagcactgagcgccctttcctctgtcctgattgtcccaagcgcttcgctgaccag
gctcgactcaccagccatcggcgagctcatgctactgagaggcccttccgttgcccacag
tgtggtcgtagcttcagccttaagatcagtctcctgcttcatcagaggggacatgcccag
gagcgccccttctcctgtcctcagtgtggcattgacttcaatggccactctgcgttgatt
cgtcaccagatgatccacacaggcgagcgtccctacccgtgcacagactgtagcaagagc
ttcatgcgtaaggaacacttgctaaaccaccggaggctgcacacaggtgagcggcctttc
cagtgtccgcactgcggcaagagcttcatccgcaagcaccacctcatgaagcaccagcgc
atccacacaggcgagcggccctacccctgtgcagtgtgcggaaggagcttccgctacaag
cagacgctcaaggaccacctacggaccggtcacagtggaggctgtgcgggtgatagggac
ccttccgtacagccaccagacccacctggtccactcttaactgccctggaaacctctggc
ctaggtgttagcactgaaggtctagagtctagtcagtggtatggggaagggagtggaggg
gtggttttatag
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integrated database retrieval system
