KEGG   Mus caroli (Ryukyu mouse): 110296312
Entry
110296312         CDS       T05910                                 
Symbol
Cop1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04115  p53 signaling pathway
mcal04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110296312 (Cop1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    110296312 (Cop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mcal04121]
    110296312 (Cop1)
Enzymes [BR:mcal01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110296312 (Cop1)
Ubiquitin system [BR:mcal04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110296312 (Cop1)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     110296312 (Cop1)
SSDB
Motif
Pfam: WD40 zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 WD40_like zf-rbx1 zf-RING_10 zf_C2H2_10 zf-RING_11 Sina_RING
Other DBs
NCBI-GeneID: 110296312
NCBI-ProteinID: XP_029335373
Ensembl: MGP_CAROLIEiJ_G0014749
UniProt: A0A6P7R2H9
LinkDB
Position
1:149863002..149984365
AA seq 732 aa
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAATLVSGGVAPAAGSGG
LGGPGRPVLVAAAVSGSASAGGAVSAGQSRLSCAARPSAGVGGSSSSLGSSSRKRPLLVP
LCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVD
NIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANV
NLMLELLVQKKKQLEAVSSAKTXKILFKWLXAARNQTHQLEQIQKELSVLEEDIKRVEEM
SGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGTSQTKKQPWYNSTLASRRKR
LTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYN
GSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWS
SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVK
LWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHR
KAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGS
ENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESNVLIAA
NSQGTIKVLELV
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgtctggtagccgccaggccggctcgggttccgctggaacgagccccggctcctcggcc
gcctcctcggtgacttccgcctcctcgtccttatcctcgtctccgtcgccgccgtccgtg
gcggcctcggcggcgacgctggtgtccggcggcgtggctccggccgcgggctccggcggc
ctcggcggcccggggcggcctgtgctggtggcggccgcggtgtctggcagcgcgagcgcc
ggcggggcggtgtccgcaggccagtcccggctcagctgtgcggccaggcccagcgccggc
gttggagggagcagctccagcctcggcagtagcagtaggaagcgacctctgctcgtcccg
ctttgcaacgggctcctcaactcctacgaggacaaaagcaacgacttcgtctgtcccatc
tgctttgatatgatcgaggaggcatacatgacaaaatgtggccacagcttttgctacaag
tgtattcatcagagtttggaggacaataatagatgtcccaagtgtaattatgttgtggac
aatattgaccatctctatcctaatttcttggtgaatgaactcattctcaaacagaagcaa
agatttgaggaaaagaggttcaagttggaccactcagtgagtagcaccaatgggcatagg
tggcaaatatttcaagatctactaggaactgatcaagataaccttgatttggccaatgtc
aacctcatgttggaattattagtgcagaagaagaaacaactggaagcagtaagtagtgcc
aaaacgtaaaagatactttttaaatggttgtgagctgctagaaatcaaacccatcaattg
gagcagatccagaaggaactaagtgttttggaagaggatattaaaagagtggaagaaatg
agtggcctgtactctcctgtcagtgaagatagcacagtgcctcaatttgaagctccttct
ccatcacacagtagcattattgattctacagaatacagccaacctccaggtttcagtggg
acctctcagacaaagaaacagccttggtataacagcacattagcatcaagacgaaagcga
ctcactgctcattttgaagacttagagcagtgttatttttctacaaggatgtctcgtatc
tcagatgacagtagaactgcaagccagttagatgaatttcaagaatgcttgtccaagttt
actcgatacaactcagtaagaccgttggccacattgtcttatgctagtgatctctataat
ggttccagcatagtttctagtattgagtttgaccgagattgtgactattttgcaattgct
ggagttacaaagaagattaaagtctatgaatatggcacagtcatccaggatgcagtggat
attcattaccctgagaatgaaatgacctgcaattccaaaatcagctgtatcagttggagt
agttaccataagaacctgctagccagcagtgattatgaaggcactgttatactatgggat
ggattcacaggacagaggtcaaaggtctatcaggaacatgaaaaaaggtgttggagtgtt
gactttaatctgatggatcctaaacttctggcttcaggttctgatgatgcaaaagtgaag
ctgtggtctaccaatttagacaattctgtggcgagcattgaggcaaaggctaacgtgtgc
tgtgtgaagttcagcccctcctccaggtaccatctggctttcggctgtgcagatcactgt
gtccactactacgaccttcgtaacactaaacagccaataatggtattcaagggacaccga
aaagcagtgtcttatgccaagtttgtgagtggtgaagaaattgtctctgcctcaacagac
agccaactaaagctgtggaatgtgggaaaaccatactgtctacgttccttcaagggtcat
attaatgaaaaaaactttgtaggccttgcttccaatggagattatatagcttgtggaagt
gagaacaactccctctacctgtattataaaggactttctaaaactttgctaacttttaag
tttgatacagttaagagtgtattagacaaagatcggaaagaagatgacacgaatgaattt
gtcagtgctgtgtgttggcgggcactatcagacggggagtccaatgtgctgattgctgct
aacagccagggtacaattaaggtgctagaattggtataa

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