Mus caroli (Ryukyu mouse): 110296312
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Entry
110296312 CDS
T05910
Symbol
Cop1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase COP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04115
p53 signaling pathway
mcal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110296312 (Cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
110296312 (Cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110296312 (Cop1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110296312 (Cop1)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110296312 (Cop1)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
110296312 (Cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
WD40_like
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
110296312
NCBI-ProteinID:
XP_029335373
Ensembl:
MGP_CAROLIEiJ_G0014749
UniProt:
A0A6P7R2H9
LinkDB
All DBs
Position
1:149863002..149984365
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AA seq
732 aa
AA seq
DB search
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAATLVSGGVAPAAGSGG
LGGPGRPVLVAAAVSGSASAGGAVSAGQSRLSCAARPSAGVGGSSSSLGSSSRKRPLLVP
LCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVD
NIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANV
NLMLELLVQKKKQLEAVSSAKTXKILFKWLXAARNQTHQLEQIQKELSVLEEDIKRVEEM
SGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGTSQTKKQPWYNSTLASRRKR
LTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYN
GSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWS
SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVK
LWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHR
KAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGS
ENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESNVLIAA
NSQGTIKVLELV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtagccgccaggccggctcgggttccgctggaacgagccccggctcctcggcc
gcctcctcggtgacttccgcctcctcgtccttatcctcgtctccgtcgccgccgtccgtg
gcggcctcggcggcgacgctggtgtccggcggcgtggctccggccgcgggctccggcggc
ctcggcggcccggggcggcctgtgctggtggcggccgcggtgtctggcagcgcgagcgcc
ggcggggcggtgtccgcaggccagtcccggctcagctgtgcggccaggcccagcgccggc
gttggagggagcagctccagcctcggcagtagcagtaggaagcgacctctgctcgtcccg
ctttgcaacgggctcctcaactcctacgaggacaaaagcaacgacttcgtctgtcccatc
tgctttgatatgatcgaggaggcatacatgacaaaatgtggccacagcttttgctacaag
tgtattcatcagagtttggaggacaataatagatgtcccaagtgtaattatgttgtggac
aatattgaccatctctatcctaatttcttggtgaatgaactcattctcaaacagaagcaa
agatttgaggaaaagaggttcaagttggaccactcagtgagtagcaccaatgggcatagg
tggcaaatatttcaagatctactaggaactgatcaagataaccttgatttggccaatgtc
aacctcatgttggaattattagtgcagaagaagaaacaactggaagcagtaagtagtgcc
aaaacgtaaaagatactttttaaatggttgtgagctgctagaaatcaaacccatcaattg
gagcagatccagaaggaactaagtgttttggaagaggatattaaaagagtggaagaaatg
agtggcctgtactctcctgtcagtgaagatagcacagtgcctcaatttgaagctccttct
ccatcacacagtagcattattgattctacagaatacagccaacctccaggtttcagtggg
acctctcagacaaagaaacagccttggtataacagcacattagcatcaagacgaaagcga
ctcactgctcattttgaagacttagagcagtgttatttttctacaaggatgtctcgtatc
tcagatgacagtagaactgcaagccagttagatgaatttcaagaatgcttgtccaagttt
actcgatacaactcagtaagaccgttggccacattgtcttatgctagtgatctctataat
ggttccagcatagtttctagtattgagtttgaccgagattgtgactattttgcaattgct
ggagttacaaagaagattaaagtctatgaatatggcacagtcatccaggatgcagtggat
attcattaccctgagaatgaaatgacctgcaattccaaaatcagctgtatcagttggagt
agttaccataagaacctgctagccagcagtgattatgaaggcactgttatactatgggat
ggattcacaggacagaggtcaaaggtctatcaggaacatgaaaaaaggtgttggagtgtt
gactttaatctgatggatcctaaacttctggcttcaggttctgatgatgcaaaagtgaag
ctgtggtctaccaatttagacaattctgtggcgagcattgaggcaaaggctaacgtgtgc
tgtgtgaagttcagcccctcctccaggtaccatctggctttcggctgtgcagatcactgt
gtccactactacgaccttcgtaacactaaacagccaataatggtattcaagggacaccga
aaagcagtgtcttatgccaagtttgtgagtggtgaagaaattgtctctgcctcaacagac
agccaactaaagctgtggaatgtgggaaaaccatactgtctacgttccttcaagggtcat
attaatgaaaaaaactttgtaggccttgcttccaatggagattatatagcttgtggaagt
gagaacaactccctctacctgtattataaaggactttctaaaactttgctaacttttaag
tttgatacagttaagagtgtattagacaaagatcggaaagaagatgacacgaatgaattt
gtcagtgctgtgtgttggcgggcactatcagacggggagtccaatgtgctgattgctgct
aacagccagggtacaattaaggtgctagaattggtataa
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integrated database retrieval system