Mus caroli (Ryukyu mouse): 110298322 Help Entry 110298322         CDS       T05910                                  Gene name Irf3 Definition (RefSeq) interferon regulatory factor 3   KO K05411   interferon regulatory factor 3 Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04620   Toll-like receptor signaling pathway mcal04621   NOD-like receptor signaling pathway mcal04622   RIG-I-like receptor signaling pathway mcal04623   Cytosolic DNA-sensing pathway mcal05133   Pertussis mcal05135   Yersinia infection mcal05160   Hepatitis C mcal05161   Hepatitis B mcal05162   Measles mcal05163   Human cytomegalovirus infection mcal05164   Influenza A mcal05165   Human papillomavirus infection mcal05167   Kaposi sarcoma-associated herpesvirus infection mcal05168   Herpes simplex virus 1 infection mcal05169   Epstein-Barr virus infection mcal05170   Human immunodeficiency virus 1 infection mcal05171   Coronavirus disease - COVID-19 mcal05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:mcal00001]  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     110298322 (Irf3)    04621 NOD-like receptor signaling pathway     110298322 (Irf3)    04622 RIG-I-like receptor signaling pathway     110298322 (Irf3)    04623 Cytosolic DNA-sensing pathway     110298322 (Irf3)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     110298322 (Irf3)   09171 Infectious disease: bacterial    05135 Yersinia infection     110298322 (Irf3)    05133 Pertussis     110298322 (Irf3)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     110298322 (Irf3)    05161 Hepatitis B     110298322 (Irf3)    05160 Hepatitis C     110298322 (Irf3)    05171 Coronavirus disease - COVID-19     110298322 (Irf3)    05164 Influenza A     110298322 (Irf3)    05162 Measles     110298322 (Irf3)    05168 Herpes simplex virus 1 infection     110298322 (Irf3)    05163 Human cytomegalovirus infection     110298322 (Irf3)    05167 Kaposi sarcoma-associated herpesvirus infection     110298322 (Irf3)    05169 Epstein-Barr virus infection     110298322 (Irf3)    05165 Human papillomavirus infection     110298322 (Irf3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:mcal03000]     110298322 (Irf3)    04131 Membrane trafficking [BR:mcal04131]     110298322 (Irf3) Transcription factors [BR:mcal03000]  Eukaryotic type   Helix-turn-helix    Tryptophan clusters interferon-regulating factors     110298322 (Irf3) Membrane trafficking [BR:mcal04131]  Autophagy   Other autophagy associated proteins    TRIM-directed selective autophagy     110298322 (Irf3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  IRF-3 IRF Motif Other DBs NCBI-GeneID:  110298322 NCBI-ProteinID:  XP_021023153 Ensembl:  MGP_CAROLIEiJ_G0029689 UniProt:  A0A6P5PW79 LinkDB All DBs Position 7 AA seq 419 aa AA seqDB search MGTPKPLILPWLVSQLDLGQLEGVAWLDESRTKFRIPWKHGLRQDAQMADFGIFQAWAEA SGAYTPGKDKPDLSTWKRNFRSALNRKEVLRLAVDNSKDPYDPHKVYEFVTPGARDFVHL GASPDTNGRSSLPHSQENLPELLDCLVLGPLTDEGSSDLAIVSDPSQRLPSPDVNNFLNP TPQENPLKQLLAEEQWEFEVTAFYRGRQVFQQTLFCPGGLRLVGSTADMTLPWQPVTLPD PEGFLTDKLAREYVGHVIKGLGNGLALWRAGQCLWAQRLGHSHAFWALGEELLPDSGRGP DGEVHKDKDGAVFDLRPFVADLIAFMEGSGHSPRYTLWFCVGEMWPQDQPWVKRLVMVKV VPTCLKELLEMAREGGASSLKTVDLHISNSQPISLTSDQYKAYLQDLVEDMDFQATGGI NT seq 1260 nt NT seq  +upstreamnt  +downstreamnt atgggaaccccgaaaccgctgattttgccctggttggtgtcacaactggacctggggcag ctggaaggcgtggcctggctggacgagagccgaacgaagttcaggatcccgtggaagcat ggcctacggcaggacgcacagatggctgactttggcatcttccaggcctgggcagaagcc agtggtgcctacaccccggggaaggataagccagacctgtcaacctggaagaggaatttc cggtcagccctgaaccgcaaagaagtgttgcggttagctgttgacaatagcaaggaccct tatgaccctcataaagtgtatgagtttgtgactccaggtgcgagggacttcgtacatctg ggtgcctctcctgacaccaatggcagaagcagcctgcctcactcccaggaaaacctaccg gagttacttgattgcctggtcttggggcccctcacagatgaggggtcctcagatctggct attgtttctgatccttctcaacgactgccaagccccgatgtgaacaacttcctaaatccc acaccccaagaaaatccactgaagcagctgctagctgaggaacaatgggagttcgaggtg accgccttctaccgaggccgccaggtcttccagcagacactcttttgcccggggggcctg cggctggtgggcagcacagctgacatgacactgccctggcagccagtcaccctgcccgat cctgaggggtttctgacggacaagcttgcgagggagtatgtggggcacgtgatcaaaggg ctgggcaacgggctggcactgtggcgggcggggcagtgcctctgggcccagcgcctaggc cactcccacgccttctgggctctgggggaggagctgcttccagacagtggtcgagggcct gatggagaggtccacaaggacaaggacggagccgtgttcgacctcaggcccttcgtggca gatctgattgccttcatggaaggaagtggacactccccacgctacactctgtggttctgc gtgggagaaatgtggccccaggaccagccgtgggtcaagaggcttgtgatggtcaaggtt gttcctacatgtcttaaggagctgttagagatggcccgggaagggggagcctcttcactg aaaacagtggacttgcacatctccaacagccagcctatatcccttacctctgaccagtac aaggcctacctccaggacttggtggaggacatggacttccaggccactggaggtatctga

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