Mus caroli (Ryukyu mouse): 110298501
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Entry
110298501 CDS
T05910
Symbol
Slx1a
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110298501 (Slx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110298501 (Slx1a)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110298501 (Slx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
T5orf172
zf-RING-like
PLATZ
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
110298501
NCBI-ProteinID:
XP_021023453
Ensembl:
MGP_CAROLIEiJ_G0030458
UniProt:
A0A6P5PWY6
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All DBs
Position
7:complement(128706007..128711402)
Genome browser
AA seq
270 aa
AA seq
DB search
MDHAARPGRFFGVYLLYCQNPRHRGRVYVGFTVNPARRVRQHNAGRKKGGAWRTSGRGPW
DMVLIIHGFPSAVAALRFEWAWQHPQASRRLTHVEPRLRSEAAFAFHLRVLAHMLRVPPW
VRLPLTLRWLRPDFRHELCPAPPAHMPITFGPPPPQPSVPKRPAVSEADSEQQLDLGTKA
RCSLCARMLQDEEGPLCCPHPGCPLRAHIICLAEEFLQEEPGQLLPLEGHCPSCKKSLLW
GNLVGQCHVDTEEEEDLELEEEHWTDLLET
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggaccatgcagcaagacccgggcgcttcttcggtgtctacttgctctactgccagaac
cctcggcatcggggccgcgtttatgttggattcaccgtcaatcccgctcgtcgggtccgg
caacacaacgcgggtcgcaagaaaggtggagcatggcggaccagcgggcgaggaccctgg
gacatggtgctgatcatacacggtttcccgtctgctgtggccgcccttcggtttgaatgg
gcctggcaacatcctcaagcttcacgccgcctgacgcatgtggagccgcgcctgcgcagc
gaggctgcctttgctttccacttgcgcgttctggcgcacatgcttcgagttcctccgtgg
gtgcgccttcctctaacactgcgctggctgcgacctgacttccgccatgaactctgtcca
gcgccaccagcacacatgcccattacctttggaccgccaccaccccagccctcggtccca
aaacgaccagctgtaagtgaggctgacagcgagcaacagctggatctaggtaccaaggcc
agatgcagtctgtgtgcacgtatgctgcaggatgaagagggccccttgtgctgccctcac
cctggttgtcccctaagggcccatatcatctgcttggcagaggagttcctgcaggaagag
cccgggcagcttctgcccctagagggacattgtcctagctgcaagaagtcactactttgg
ggaaacctggttgggcagtgccacgtggacacagaggaggaagaggatttggaattagag
gaggaacactggacagacttgctggagacttga
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integrated database retrieval system
