KEGG   Mus caroli (Ryukyu mouse): 110300071
Entry
110300071         CDS       T05910                                 
Name
(RefSeq) CD209 antigen-like protein C
  KO
K06563  C-type lectin domain family 4 member L/M
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03260  Virion - Human immunodeficiency virus
mcal03264  Virion - Flavivirus
mcal04145  Phagosome
mcal04625  C-type lectin receptor signaling pathway
mcal05152  Tuberculosis
mcal05162  Measles
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03260 Virion - Human immunodeficiency virus
    110300071
   03264 Virion - Flavivirus
    110300071
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110300071
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    110300071
 09160 Human Diseases
  09172 Infectious disease: viral
   05162 Measles
    110300071
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    110300071
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcal04131]
    110300071
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:mcal04054]
    110300071
   04090 CD molecules [BR:mcal04090]
    110300071
   04091 Lectins [BR:mcal04091]
    110300071
Membrane trafficking [BR:mcal04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    110300071
Pattern recognition receptors [BR:mcal04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   110300071
CD molecules [BR:mcal04090]
 Proteins
  110300071
Lectins [BR:mcal04091]
 C-Type lectins
  Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
   DC-SIGN subgroup
    110300071
SSDB
Motif
Pfam: Lectin_C DUF624
Other DBs
NCBI-GeneID: 110300071
NCBI-ProteinID: XP_029336767
Ensembl: MGP_CAROLIEiJ_G0030788
UniProt: A0A6P7R833
LinkDB
Position
8:942640..945537
AA seq 293 aa
MAGEPEFHQPKNHXEEEVTSGDQGFAEHDPEGLICSSKSLQGTRMTQGQRCQGLSAEGTQ
QSRICSLGAQLCPSAGSAGHLTQVPWLLLLLISLGLFLLMLATLAQVSRIRAYSQGQTQD
QQGSSSLDKVAVPWEQTHSSLEQIQQIQQQLTQFXASLAGLCRPCPWDWELFQGSCYLFS
RTLGSWETSASSCKDLGAHLVIVNSVSEQQFLKYWDIRKNQLTWIGLSDHRSEGSWQWVD
DTPLKLSFWKEGEPNNEGDEDCVVMAEDKWNDSRCTANNFWVCEQPSAPCPRH
NT seq 882 nt   +upstreamnt  +downstreamnt
atggcaggagagccagagttccatcagccaaagaaccatgangaggaggaggtcacatct
ggagaccagggatttgctgagcatgaccccgagggtctcatttgcagctccaagagttta
caaggtaccaggatgactcaggggcagaggtgtcagggactctctgcagaaggaacacag
cagagcaggatctgctccctgggagctcagctctgcccctctgccggttctgcagggcat
ctgacccaagtcccctggcttctgctgcttctcatctctttgggcctctttttgcttatg
ttggccaccctggctcaagtctccaggattcgtgcatactcacagggacagacccaggat
caacagggtagctccagcttggacaaggttgctgttccttgggagcagacacactccagc
ttggagcagatccagcagatccagcagcagctgactcagttcaangcctcgctggctggc
ctgtgccggccctgtccctgggactgggagctcttccagggaagctgctacctcttctcc
agaaccctgggcagctgggaaacctctgcctcctcctgcaaggatctcggggcccacctg
gtgattgtcaacagtgtttcagagcagcaattcctcaaatactgggacatcagaaagaat
cagctcacctggatcggcctcagcgatcacagaagtgaaggttcctggcagtgggtagat
gacaccccactcaaactcagcttctggaaagaaggggaacccaataacgaaggcgacgag
gactgcgtggtaatggcagaagacaaatggaacgacagccgttgtactgcaaacaacttc
tgggtctgtgagcagccctcggctccctgccctcgccactga

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