Mus caroli (Ryukyu mouse): 110300286 Help Entry 110300286         CDS       T05910                                  Gene name Cdh1 Definition (RefSeq) cadherin-1   KO K05689   cadherin 1, type 1, E-cadherin Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04015   Rap1 signaling pathway mcal04371   Apelin signaling pathway mcal04390   Hippo signaling pathway mcal04514   Cell adhesion molecules mcal04520   Adherens junction mcal05100   Bacterial invasion of epithelial cells mcal05200   Pathways in cancer mcal05213   Endometrial cancer mcal05216   Thyroid cancer mcal05218   Melanoma mcal05219   Bladder cancer mcal05226   Gastric cancer Brite KEGG Orthology (KO) [BR:mcal00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     110300286 (Cdh1)    04390 Hippo signaling pathway     110300286 (Cdh1)    04371 Apelin signaling pathway     110300286 (Cdh1)   09133 Signaling molecules and interaction    04514 Cell adhesion molecules     110300286 (Cdh1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04520 Adherens junction     110300286 (Cdh1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     110300286 (Cdh1)   09162 Cancer: specific types    05226 Gastric cancer     110300286 (Cdh1)    05216 Thyroid cancer     110300286 (Cdh1)    05218 Melanoma     110300286 (Cdh1)    05219 Bladder cancer     110300286 (Cdh1)    05213 Endometrial cancer     110300286 (Cdh1)   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     110300286 (Cdh1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:mcal03036]     110300286 (Cdh1)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:mcal04515]     110300286 (Cdh1)    04090 CD molecules [BR:mcal04090]     110300286 (Cdh1) Chromosome and associated proteins [BR:mcal03036]  Eukaryotic type   Centrosome formation and ciliogenesis proteins    Other centriole associated proteins     110300286 (Cdh1) Cell adhesion molecules [BR:mcal04515]  Cadherins   Major cadherins    110300286 (Cdh1) CD molecules [BR:mcal04090]  Proteins   110300286 (Cdh1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_C Cadherin_pro Cadherin_2 Cadherin_3 Actino_peptide Motif Other DBs NCBI-GeneID:  110300286 NCBI-ProteinID:  XP_021026066 Ensembl:  MGP_CAROLIEiJ_G0031521 UniProt:  A0A6P5Q2F0 LinkDB All DBs Position 8 AA seq 884 aa AA seqDB search MGARCRSFSALLLLLQVSSWLCQEPEPESCSPGFSSEVYTFLVPERHLERGHVLGRVRFE GCTGRPRTAFFSEDSRFKVATDGTITVKRHLKLHKLETSFLVHAWDSSHRKLSTKVTLKS MGHHHHRHHHRDPVSESNPELLMFPSVYPGLRRQKRDWVIPPISCPENEKGEFPKNLVQI KSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSN GEAVEDPMEIVITVTDQNDNRPEFIQAVFEGSVAEGALPGTSVMQVSATDADDDVNTYNA AIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYHTYTLVVQAADLQGEGLSTT AKAVITVTDINDNAPVFNPSTYQGQVPENEVNARIATLKVTDDDAPHTPAWNAVYTVVND PDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVI DVNEAPIFMPVERRVEVPEDFGVGQEITSYTAREPDTFMGQKITYRIWRDTANWLEINPE TGAIFTRAEMDREDTEHVKNSTYVALIIATDDGSPIATGTGTLLLVLLDVNDNAPIPEPR NMEFCQRNPQPHIITILDPDLPPNTSPFTAELTHGASVNWTIEYNDAAQESLILQPRKDL EIGEYKINLKLADNQNKDQVTTLDVHVCDCEGTVNNCMKAGAVEAGLEVPAILGILGGIL ALLILILLLLLFLRRRTVVKEPLLPPDDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDA RPEVTRNDVAPTLMSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGS GSEAASLSSLNSSESDQDQDYDYLNEWGNRFKKLADMYGGGEDD NT seq 2655 nt NT seq  +upstreamnt  +downstreamnt atgggagcccggtgccgcagcttttccgcgctcctgctcctgctgcaggtctcctcatgg ctttgccaggagccggagcctgagtcctgcagtcccggcttcagttctgaggtctacacc ttcctggtgccggagaggcacctggagagaggccacgtcctgggcagagtgagatttgaa ggatgcactggccggccaaggacagccttcttttcagaagactcccgattcaaagtggcg acagacggtaccatcacagtcaagcggcatctaaagctccataaactggagaccagtttc cttgtccacgcctgggactccagtcataggaagctgtctaccaaagtgacgctgaagtcc atggggcaccaccatcaccggcaccaccaccgcgaccccgtctctgaatccaacccagag ctgctcatgtttcccagcgtgtacccaggtctcagaagacagaaacgagactgggtcatc cctcccatcagctgccccgaaaatgaaaagggcgaattcccaaagaacctggttcagatc aaatccaacagggacaaagaaacaaaggttttctacagcatcaccggccaaggagctgac aaaccccctgttggtgttttcatcattgagagggagacaggctggctgaaagtgacacag cctctggatagagaagccattgccaagtacatcctctattctcatgccgtgtcatcaaat ggggaagcagtggaggatcccatggagatagtgatcacagtgacagatcagaatgacaac aggccagagttcatccaggcggtctttgagggatccgttgcagaaggcgctcttccagga acctctgtgatgcaggtctcagccaccgatgcagacgatgatgtcaacacctacaacgct gccatcgcctacaccattgtcagccaggatcctgagctgcctcacaaaaacatgttcact gtcaatagggacaccggggtcatcagtgtgctcacctccgggctggaccgagagagttac catacatacactctggtggttcaggctgctgaccttcaaggcgaaggcttgagcacaaca gccaaggctgtgatcactgtcacggatattaatgacaacgctcctgtcttcaacccgagc acgtaccagggtcaagtgcctgagaatgaggtcaatgcccggattgccacactcaaggtg actgatgatgatgccccccacaccccggcatggaatgctgtgtacaccgtagtcaatgat cctgaccagcagttcgttgtcgtcacagaccccacgaccaatgatggcattttgaaaaca gccaagggcttggattttgaggccaagcagcaatacattcttcatgtgagagtggagaac gaggaaccctttgaggggtctcttgtcccttccacagccactgtcaccgtggacgtgata gatgtgaatgaagcccccatctttatgcctgtggagaggagagttgaagtgccggaagac tttggtgtgggtcaggaaatcacatcttataccgctcgagagccggacacgttcatgggt cagaagatcacgtatcggatttggagagacactgccaactggctagagattaacccagag actggtgccattttcacgcgcgctgagatggacagagaagacactgagcatgtgaagaac agcacatacgtagctctcatcatcgccacggatgacggttcacccattgccaccggcacg gggactcttctcctggtcctgttagatgtcaatgacaacgctcccatcccagaacctcga aacatggagttctgccagaggaacccacagcctcatatcatcaccatcttggatccagac cttccccccaacacgtcccccttcactgctgagctaacccatggggccagcgtcaactgg accattgagtataatgacgcagctcaagaatctctcattttgcaaccaagaaaggactta gagattggcgaatacaaaatcaatctcaagcttgcggataaccagaacaaagaccaagtg accacgttggacgtccatgtgtgtgactgtgaagggacggtcaacaactgcatgaaggcg ggagccgtggaagcaggattggaagttcctgccatccttggaatccttggagggatcctc gccctgctgattctgatcctgctgctcctactgtttctgcggaggagaacggtggtcaaa gagcccctgctgccaccagatgatgatacccgggacaatgtgtattactatgatgaagaa ggaggtggagaagaagaccaggactttgatttgagccagctgcacaggggcctggatgcc cgaccggaagtgactcgaaatgatgtggctcccaccctcatgagcgtgccccagtatcgt ccccgtcctgccaatcctgatgaaattggaaacttcatcgatgaaaacctgaaggcagct gacagcgaccccacggcacccccttatgactctctgttggtgttcgattacgagggcagt ggttctgaagctgctagcctgagctcactgaactcctctgagtcggatcaggaccaggac tacgattatctgaacgagtggggcaacagattcaagaagctggcggacatgtacggcggt ggcgaggatgactag

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