Mus caroli (Ryukyu mouse): 110302049
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Entry
110302049 CDS
T05910
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 4F-like isoform X1
KO
K22265
NACHT, LRR and PYD domains-containing protein 4
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110302049
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcal04054
]
110302049
Membrane trafficking [BR:
mcal04131
]
Autophagy
Other autophagy associated proteins
Others
110302049
Pattern recognition receptors [BR:
mcal04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110302049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
PYRIN
NLRC4_HD2
LRR_6
NOD2_WH
LRR_4
AAA_16
NB-ARC
nSTAND3
PIF1
AAA_30
DUF5085
AAA_7
Motif
Other DBs
NCBI-GeneID:
110302049
NCBI-ProteinID:
XP_021028468
Ensembl:
MGP_CAROLIEiJ_G0032874
UniProt:
A0A6P5QK84
LinkDB
All DBs
Position
9:complement(119898234..119927414)
Genome browser
AA seq
950 aa
AA seq
DB search
MASFISDFGLMWYLKELNKKEFIKFKEFLIQEILKLKLKQISWTKVKKASREDLANLLLK
CYEENQAWDMTFNILQKINRKDLTERATEEIADSSPLGLTDSGNPKLYRDHLKKKLTHDC
SKKFNVRIQDFIKETFIQNDYDTFENLLISKGTEKKPHMVFLQGMAGIGKTMMLKNLMLA
WSKGLVFQNKFSYTFYFCCQDMKQLKTASLAELISREWPSPSAPIEEILSQPEKLLFIID
SLEGMECDLTKQESELCDNCMKKQPVSILLSSLLTRKMLPESSFLLSTTPETFEKMEDRI
LCTDVKTATAFDERSIKIYFHRLFQDKIRAQEAFSLVRENEQLFSICQVPLLCWMVATCL
KKEIEKGRDPVSVCRHITSLYTTHILNLFIPQSAQYPSKKIQEQLQGLCSLAAEGMWTDT
FVFGEEALRRNGILDSDIPTLLDIGMLGKIREFENSYIFLHPSVQEVCAAIFYLLKSHVD
HPSQDVKSIETVLFMFLKKVKTQWIFLGCFIFGLLQKSEQEKLVVFFGRRLSQKIQHKLY
QCLETISGNAELQEQIDGMKLFSCLSEIEDEAFLVKVMSYMQQINFVAKNYSDLILAAYC
LKHCSTLKKLSFSTQNVLNEKGGQRCMKKLLICWNDMCSVFVRSKDIQVLQIKDTSFSEP
AIRVLYESLKYPSFTLNKLVANNVHFFGDNHMFFELIQNCSLQYLDLGCSFLTHSEVKLL
CDILNQAECNIEKLVVSHCKLSPDDCKIFGSVLMSSKTLKVLNLAYNNLNQGISLLCKAL
CHPDCILEYLVLANCSLSEQCWDYLSEVLRQNKTLSHLDISSNDLKDKGLKILCRALTLP
YCALKSLYLNNCQITARGCQDLAKVLRNNQNLKCLHISNNKLKDTGMMLLCKAIKHPNCH
LEDLRLEACEITGASNEDLRYAFMQCETLQMINLMGNAFEVSRMIFFPRF
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcatctttcatttcagattttggccttatgtggtacttgaaagaactaaataagaag
gagttcatcaagtttaaggaatttctcatacaggagattctaaaattgaagctgaaacag
atttcttggaccaaagtgaagaaggcatctagggaagatcttgccaacttacttttgaaa
tgttatgaggagaatcaggcctgggatatgaccttcaacatcctccagaagatcaatagg
aaagatctcactgagagggcaacagaagagattgctgattcttcccctcttggactcact
gactcaggaaacccaaagttatatcgagatcatctgaagaaaaagctgacccatgattgc
tccaaaaaatttaacgtccgtattcaagatttcattaaagagactttcattcagaatgac
tatgacacttttgagaaccttctcatatcaaagggaactgaaaagaagccacacatggtg
ttcctgcaaggcatggctggaattggcaagacaatgatgttgaaaaatttaatgctggcc
tggtcaaaaggcctggtgtttcaaaacaaattctcttacactttctacttctgctgtcaa
gatatgaagcagttgaagacagccagccttgctgaacttatctccagagagtggcccagc
ccctcagctcctatagaggagatcctatcccaacctgagaaactcttatttatcattgac
agcttggaagggatggaatgtgatttaaccaaacaggaatcagagctgtgtgataactgc
atgaagaagcagccagtgagtatactgctgagcagtttgctcacgaggaagatgctccct
gaatcctctttcctcctctccactaccccagagacttttgagaaaatggaggacaggatt
ctgtgcacagatgtgaaaacagcaactgcattcgatgagagaagtattaagatatatttc
cacagattgttccaagataagatcagagcccaagaggccttcagtttggtgagagaaaac
gagcagctgtttagcatatgtcaggtccctctgctctgctggatggtggctacttgtcta
aaaaaagagatagagaagggaagagacccagtctctgtctgccgacatatcacttccctg
tataccactcacatcttgaatttgttcattccccaaagtgcccaatatccaagtaagaaa
atccaagagcagctgcagggcttgtgttctctggccgctgagggcatgtggactgacaca
tttgtgtttggtgaggaggctctcaggagaaatgggatcttggactctgacatccccaca
cttttggacattggaatgcttggaaagatcagagaatttgaaaattcttacatattcctc
cacccatctgttcaggaggtctgtgctgccatcttttatctgctaaagagccatgtggac
caccctagccaggatgttaaaagtatagagactgtcttgtttatgtttttaaagaaagta
aaaacacaatggatatttttgggctgtttcatctttggtcttttacagaaatcagaacaa
gaaaagcttgtggtgttttttggccgcaggttgtctcagaaaatacagcataagttatat
cagtgcctggaaaccataagtggcaatgcagagcttcaagaacaaatagatggcatgaaa
ttgttttcctgtctgtctgagatagaagatgaagccttcctagtgaaagtaatgagttat
atgcaacagattaactttgtggctaagaattattctgatttaattcttgctgcctattgc
ttgaaacactgttctacactgaagaaactatccttttcaacccaaaatgtcctgaatgaa
aaaggaggccagaggtgtatgaaaaagctactcatctgttggaatgatatgtgctctgta
tttgtaaggagtaaagacatccaggtactccaaataaaagacactagtttcagtgagcca
gccattcgagtcttgtatgaatctctgaagtaccccagcttcacccttaacaaacttgtg
gcaaataatgtgcacttctttggtgataaccacatgttctttgagttgattcagaactgc
agtttgcaatatttggacctcggctgctcatttctgactcacagtgaggtgaaactgttg
tgtgatatcttgaaccaggcagagtgcaacatagaaaaacttgtggtatcacactgtaaa
ctttcacctgatgactgcaagatctttggctccgtcctgatgagcagcaagacattgaag
gttcttaatttggcatacaacaatttgaaccaaggaatatccttactgtgcaaggctttg
tgccacccagactgcattctggagtacttagtgttggccaactgttccctcagtgagcaa
tgttgggactacctttctgaagttcttaggcagaacaaaactctgagccatctagacatc
agctccaatgacctgaaggataaaggactgaagattctctgtagggctctgactctccca
tactgcgccctgaagtcactatatttgaacaattgtcaaatcaccgcaaggggctgccag
gacctggctaaagtcctgaggaacaatcagaacctgaagtgcttacacatttcaaacaat
aagctaaaagacactggtatgatgctgctgtgtaaggctataaaacatcccaactgccac
ttagaggatctacgattggaagcctgtgagataactggtgccagtaatgaggaccttcgt
tatgcttttatgcagtgtgagaccttgcagatgatcaacctaatggggaatgcctttgaa
gtcagtaggatgattttctttccgaggttctga
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