Mus caroli (Ryukyu mouse): 110302801
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Entry
110302801 CDS
T05910
Symbol
Apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal01524
Platinum drug resistance
mcal04115
p53 signaling pathway
mcal04210
Apoptosis
mcal04215
Apoptosis - multiple species
mcal05010
Alzheimer disease
mcal05012
Parkinson disease
mcal05014
Amyotrophic lateral sclerosis
mcal05016
Huntington disease
mcal05020
Prion disease
mcal05022
Pathways of neurodegeneration - multiple diseases
mcal05134
Legionellosis
mcal05152
Tuberculosis
mcal05160
Hepatitis C
mcal05161
Hepatitis B
mcal05162
Measles
mcal05164
Influenza A
mcal05168
Herpes simplex virus 1 infection
mcal05169
Epstein-Barr virus infection
mcal05200
Pathways in cancer
mcal05222
Small cell lung cancer
mcal05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110302801 (Apaf1)
04215 Apoptosis - multiple species
110302801 (Apaf1)
04115 p53 signaling pathway
110302801 (Apaf1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110302801 (Apaf1)
09162 Cancer: specific types
05222 Small cell lung cancer
110302801 (Apaf1)
09172 Infectious disease: viral
05161 Hepatitis B
110302801 (Apaf1)
05160 Hepatitis C
110302801 (Apaf1)
05164 Influenza A
110302801 (Apaf1)
05162 Measles
110302801 (Apaf1)
05168 Herpes simplex virus 1 infection
110302801 (Apaf1)
05169 Epstein-Barr virus infection
110302801 (Apaf1)
09171 Infectious disease: bacterial
05134 Legionellosis
110302801 (Apaf1)
05152 Tuberculosis
110302801 (Apaf1)
09164 Neurodegenerative disease
05010 Alzheimer disease
110302801 (Apaf1)
05012 Parkinson disease
110302801 (Apaf1)
05014 Amyotrophic lateral sclerosis
110302801 (Apaf1)
05016 Huntington disease
110302801 (Apaf1)
05020 Prion disease
110302801 (Apaf1)
05022 Pathways of neurodegeneration - multiple diseases
110302801 (Apaf1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110302801 (Apaf1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
110302801 (Apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NB-ARC
APAF1_C
APAF-1-like_WHD
ANAPC4_WD40
CARD
NBCH_WD40
WD40_like
RMC1_N
Nup160
Ge1_WD40
CARD_2
WDR54
AAA_16
AAA_22
ATPase_2
AAA_18
NACHT
Motif
Other DBs
NCBI-GeneID:
110302801
NCBI-ProteinID:
XP_021029198
Ensembl:
MGP_CAROLIEiJ_G0015723
UniProt:
A0A6P5QFQ7
LinkDB
All DBs
Position
10:complement(84744103..84835313)
Genome browser
AA seq
1248 aa
AA seq
DB search
MDAKARNCLLQHREALEKDIKTSYIMDHMISNGVLSVIEEEKVKSQATQYQRAAALIKMI
LNKDNCAYISFYNALLHEGYKDLAALLQSGLPLVSSSSGKDTGGITSFVRTVLCEGGVPQ
RPVIFVTRKKLVHAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFSGG
VHWVSIGKQDKSGLLMKLQNLCTRLEQAESFSQRLPLNIEEAKDRLRVLMLRKHPRSLLI
LDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVTGPKHVVPVESGLGREKGLEILSLFVNM
KKEDLPAEAHSIIKECKGSPLVVSLIGALLRDFPNRWAYYLRQLQNKQFKRIRKSSSYDY
EALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLWDLETEEVEDILQEFVNK
SLLFCNRNGKSFCYYLHDLQVDFLTEKNRSQLQDLHRKMVTQFQRYYQPHTLSPVQEDCM
YWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVAYRHILDEKDCAVC
ENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYRQAKLKAKQEVDTGRLYLEWINKT
TIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVL
CCAFSSDDSYIATCSVDKKVKIWDSATGKLMHTYDEHSEQVNCCHFTNKSNHLLLATGSN
DFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSI
NVKRFFLSSEDPAEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSDLLAEIHTGHHS
TIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTAS
DDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPE
AQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGTGHKKAVRHIQFTADGKTLISS
SEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNIITGRIERDF
TCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGIL
LATGDDNGEIRIWNVSDGQLLHSCPPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGYLK
WWNFATGDSSQIFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVLE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaggcccgcaattgtttgcttcaacatagagaagctttggaaaaggacatc
aaaacatcctacatcatggatcacatgatcagtaatggcgtcttgtcagtgatagaggag
gagaaggtcaaaagtcaggccactcaatatcaacgagcagccgctttaattaaaatgata
cttaataaagacaactgtgcctacatttcattctacaacgctctgctacatgagggctat
aaggaccttgctgcacttctgcagagtggccttcctcttgtgtcatcttccagtggcaag
gatacaggtggaataacttcatttgtaaggacagtgctgtgtgaaggtggagtaccccag
aggccggttattttcgttactagaaagaagctggtccatgcgattcagcagaagctctgg
aaactgaatggagaaccagggtgggtcaccatctatgggatggcaggctgtggcaagtct
gtgttagctgcggaagccgttcgagatcactccctcttagaaggttgcttttcagggggt
gtacactgggtttccattggaaaacaagacaaatctgggcttctcatgaaactgcagaat
ctgtgcacgcggttggaacaagcagagagtttctctcagaggcttccacttaatattgag
gaggccaaagaccgtctccgtgttctgatgctgcgcaaacacccaaggtctctgttgatc
ttggatgacgtttgggatccttgggtgttaaaagcttttgacaatcagtgtcagattctt
ctcacaaccagagataagagtgttacagattcagtaacgggtcctaagcatgttgtccct
gtggagagtggtctagggagagagaaaggacttgagatcttgtcactttttgttaacatg
aagaaagaagatctgccagcggaggctcacagtattataaaggaatgcaaaggttctcct
cttgtagtgtctttaattggtgcgcttttacgtgattttcccaatcgctgggcatactac
ctcagacagcttcagaataagcagtttaagagaataaggaagtcttcctcttatgattat
gaggctctggatgaagccatgtcgataagtgttgaaatgctcagagaagacatcaaagac
tattacacagacctttccatccttcagaaggacgtcaaggtgcctacaaaggtgttgtgc
gttctctgggacttggaaacggaagaagttgaagacatcctgcaggagttcgttaataag
tctctcttattctgtaatcggaatggaaagtcattttgttattatttacatgatcttcaa
gtagattttcttacagagaagaatcgcagtcagcttcaggatctgcacaggaagatggtc
actcagtttcagaggtattaccagccacacacgctgtctccagtccaggaggactgcatg
tattggtacaacttcctagcttatcacatggccagtgccaatatgcacaaagaattgtgt
gctttaatgttttccctggactggattaaagcaaaaacagaacttgtcggccctgcccat
ctgattcatgagttcgtggcatataggcatatattggatgaaaaggattgtgcagtctgt
gagaattttcaagagtttttatctttaaatggacacctccttggacgacagccatttcct
aatattgtacagctgggcctctgtgaaccagaaacttccgaagtttatcgacaagcaaag
ctgaaggccaagcaggaggtggatactgggcgcctttacctggaatggataaacaaaaca
actatcaagaatctgtcccgcttagtcgtccgcccccacacagatgctgtttaccacgcg
tgtttttctcaggatggtcagagaatagcttcttgtggagctgataaaaccttacaggtg
ttcaaagccgagacaggagagaaacttcttgacatcaaagctcatgaagatgaggtgctc
tgctgcgcgttctcctcagacgacagttacatagcgacctgctcagtggataagaaggtt
aagatttgggattctgcgactgggaagctcatgcacacttacgatgagcactcagagcaa
gtcaattgctgccatttcaccaacaagagtaaccaccttctcttggccaccgggtcaaat
gatttcttcctcaagctctgggatttgaatcaaaaagaatgtcgaaataccatgtttggt
cacacgaactcagtcaaccactgcaggttctcaccagacgatgagctcttggctagctgc
tcagctgacgggactttaaggctttgggatgtgagatcagcaaacgagaggaaaagcatt
aatgtgaagcgcttcttcctgagttcagaagaccctgcagaggatgtggaggtgatcgtg
aagtgctgttcctggtctgcagatggtgacaaaataatagtggcagccaaaaacaaagtc
ctcctttttgatattcatactagtgacctattggcagagatccacacaggccatcacagc
accatccagtactgtgacttctccccctatgaccatttggctgtgattgccctgtctcag
tactgtgtggagttgtggaacatagactcccgcctaaaggtggccgactgcagaggacat
ttgagttgggttcacggtgtgatgttttctcccgatggctcgtcatttttgacagcttct
gatgaccaaacaataagggtctgggagacaaaaaaggtatgcaagaactctgccatcgtg
ctaaagcaggaaatagacgtcgtgtttcaagagaacgaaacgatggtccttgcagttgac
aacataagaggcctgcaactcattgctggaaaaacaggccagattgattacctgcctgaa
gcccaagtgagttgctgctgcctcagtccacaccttgagtacgtggcattcggagatgaa
gatggagccattaagattatagaacttccaaacaacagagttttcagttctgggactggg
cacaagaaagctgtccggcacatccagttcacagctgatgggaagacactgatttcaagt
tctgaagattctgtgattcaggtatggaattggcagacaggggactatgtatttttgcaa
gcccaccaggaaacagtaaaggacttcaggctcctccaagattcaagattgctttcttgg
tcgtttgatggaacggtgaaggtgtggaatatcattaccggaagaatagaaagagacttt
acttgtcatcagggcacagtgctttcctgtgctatctcttctgatgcgaccaagttttca
tctacctctgctgataagactgccaagatctggagttttgacctcctttcccctcttcat
gagctgaagggccataatggctgtgtccgctgctctgccttctcgctggatggcatcctg
ttggcaactggagatgacaatggagaaatccggatatggaatgtctcagatggccagctt
cttcattcgtgtcctccgatctcggtagaggaaggaactgctacccacggtggctgggta
actgatgtgtgcttctctcccgacagtaaaacgcttgtctctgctggaggatatctcaag
tggtggaattttgccactggggactcctcacagatcttctacacaaatggaacaaacctc
aagaaaatacacgtgtcccctgacttcagaacctacgtgactgtcgataatctcggtatt
ttatatattttacaggttttagagtaa
DBGET
integrated database retrieval system