Mus caroli (Ryukyu mouse): 110302985
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Entry
110302985 CDS
T05910
Symbol
Jmjd1c
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X3
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110302985 (Jmjd1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110302985 (Jmjd1c)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
110302985 (Jmjd1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
FYVE
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
110302985
NCBI-ProteinID:
XP_021029514
Ensembl:
MGP_CAROLIEiJ_G0015407
UniProt:
A0A6P5Q9Q1
LinkDB
All DBs
Position
10:61298333..61453589
Genome browser
AA seq
2348 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRASQNISTVHGHYTRAQANSPRPAMNSQAAVPKQNTHQ
QQQQRSIRPNKRKGSDSSIPDEEKMKEDKYDCVSRGENPKGKNKHMVTKRRKPEEAEKRL
SMKRLRADNASDASESSDAESSSKRVTETSSEPMPEYEPKNKVTSKVNGEEGQSQAVEEA
GEDTLIDTRPPWDQMQEDKNHDEGEKPKSMDSHLQDKMTLRSSEQATVADHNSNDSVLQE
CNVEKQRTVELLPKDRLVSRTPTPKCVTDIKNDTHSERAAQENLNTFGLQTPENMDPNVS
DSKHSNAKYLETAKQDCDQSWVSDVVKVDLTQSSVTNAPSGSDKRDTEKERNHYVSYMSS
LSAVSVTEDQLHKRSPPPETIKAKLTTSVDTQKAKSSSSPEVVKPKIAHSPDSVKSKAAY
GNSQAVGERRLASKIEHELSRGSFHPVPTRGSALETTKSPLIIDKNEHFTVYRDPALIGS
ETGANHISPFLSQHPFSLHSSSHRTCLNPGTHHPALTPGPHLLAGSTSQTPLPTINTHPL
TSGPHHPVHHPHLLPTVLPGVPTASLLSGHPRLESAHASSLSHLALAHQQQQQLLQHQSP
HLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAEASLRRNSPS
PWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPHKITVHSSPPLTKTLADHHKEELERKA
FMEPLRSNASTSVKGDLDLNRSQAGKDCHLHRHFVGPRPPQETGERLNKYKEEHRRILQE
SIDVAPFTTKIKGHEVERENYSRVVPSSSSPKSHAIKQDKDVDRSVSEIYKMKHSVPQSL
PQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQNNNLSATANPQTHSFISSLSKPPPLI
KHQPESESLVGKIPDHLPHQSASHSVTTFRSDCRSPTHLTVSSTNALRSMPALHRAPVFH
PPIHHSLERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDSQSNFKNSSDQ
SLTEMWRSNNNLNREKAEWPVEKSSGKSQAAVASVIVRPPSSTKVDSVPSVPLASKDRVC
ERSSSGANKTDYLKPEAGETGRIILPNVNLESAHVKSEKNFEVVSQGNVPVSVMSAVNVV
STTKTDVFTSAATTTSVSSLGSAETIYSLSNTISASTPLECTSSKNVSQSVAQAKDCKVS
TAVPVTLACSKTGSGVQPGSGFSGTTDFIHLKKHKAALAAAQFKNSNVSEAELNTVRNQT
VAASLPLDSTMTCTASNKAISVGNGPAAQPSQPNYHTKLKKAWLTRHSEEDKNTNKMENS
GNSVSEIIKPCSVNLIASTSNDIQNSVDGRVAVDKYGRDEKVSRRKAKRTYESGSESGDS
DESESKSEQRTKRQPKPTYKKKQNDLQKRKGEVEEDSKPNGVLSRSAKDKSKLKLQNSNS
AGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKKGEESTHSPVF
CRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDEVDVETSKYILDIIGD
KFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNVHWVCRKCGFVACLDC
YKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHILREKYGIKS
HCHCTNRQNLQGGNVPTMNGVSQVLQNVLHHNNKTSVCLPESQQQNTPQKSQTNGNSSPG
SSSTDSRLTPPESQSPLHWLADLAEQKSREEKQENKEFTLEREIKEDGDQDASDSPNGST
SPPASQSNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGASSGKGGRTMPNILDDI
IASVVENKIPPNKTSKINIKSEPHEEPKESSLPATDESNKSYRDIPHSWICDQHILWLKD
YKNSNNWKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQADLLNCKDSIVSN
ANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDFKTMMPTRYEDFLRCLPLPEYCN
PEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEASDVVNVLVYVGIA
KGNGVLSKAGILKKFEEEELDDVLRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKE
QGLEVLPEHDPIRDQSWYVNRKLRQRLLEEYGVRACTLIQFLGDAIVLPAGTLHQVQNFH
SCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAVKEMVRALKMHED
EVEDMEDT
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccttattcattaaatggatacagagtgagagtctatagacaagattctgcc
acccagtggtttactggcataattactcatcatgatctcttcacccgcaccatgatcgtt
atgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatgaccttt
ctagatgatgtcgttcactctttgttaaaaggtgaaaatattggcattacatcacgacga
aggtctcgtgccagtcaaaatatcagcactgttcacggtcattatacacgtgctcaagca
aatagtcccagaccagcaatgaactctcaagctgctgtaccaaaacagaacacacaccag
caacagcaacaaagaagtattcgtccaaataagaggaagggctcagatagcagcatacct
gatgaagagaagatgaaggaagataaatatgattgtgtatcacgaggagaaaatcctaaa
ggtaagaacaagcacatggtgactaaacggcggaaacccgaggaggctgagaagagactg
agcatgaaaaggctccgggcagacaatgcctccgacgcctccgagagtagtgacgcagag
agctccagcaagagagtgactgagacttcctctgaaccaatgccagagtatgaaccgaaa
aataaagtcacctcaaaggtaaacggagaggagggacagtcccaggctgttgaagaggca
ggagaagacaccctgatagatactcggcctccctgggaccagatgcaggaagataaaaac
cacgatgaaggggagaagcccaagtccatggacagccaccttcaagacaaaatgactctc
cgttcatctgagcaagccacagttgctgaccacaattctaatgattcagtccttcaagaa
tgcaatgtggaaaagcaacgcacagtggaattgttaccaaaggacaggttagtgtccaga
acaccgacacccaaatgtgttacggatatcaagaacgacactcattcagagagggcggct
caggaaaatttaaatacttttggcctccagacacctgagaacatggatccaaatgttagt
gattccaaacattcaaatgctaaatacctagaaacagcaaagcaagattgtgaccagagc
tgggtcagtgatgtagtgaaagtggatttaactcagtcaagtgttacaaatgctccttca
ggaagtgataagcgagatacggagaaagagagaaatcactatgtctcatacatgtcttca
ttaagtgcagtttctgtcacagaggatcagctacataaacgaagtccacccccagaaact
ataaaagctaaactaactacttcagtagatacccagaaggcaaaatccagttcttcacct
gaagttgttaaacccaagatcgctcattctcctgattctgtgaagtctaaagctgcttat
gggaacagtcaagctgttggggagcgaaggctggcaagtaaaatagagcatgagttatcc
agaggtagtttccatccagttcctactcgaggcagtgctttggaaactacaaagagccct
ctaatcattgataaaaacgagcacttcacagtctatagggatcctgctcttattggatca
gaaacaggagctaatcacatttcaccttttttgagccagcatcctttttctcttcattcc
tcatcccatagaacgtgtttaaacccaggtacccatcaccctgccttaacgccaggaccc
cacttactagctgggtcaactagtcaaactccattacctaccattaacactcaccctctc
actagtggtccacaccatcctgtccatcaccctcatttgcttcccactgtgttacctgga
gtgcctactgcctctttactcagtggccacccacgtctagagagtgctcatgccagcagc
ttgagccacttagcactagcacaccagcagcagcaacagttgttacagcaccagtcacct
catcttcttggacaagcccatccttccgcttcatataatcagcttggactttatccaatt
atttggcaatatccgaatggaacacatgcatactcaggacttggtctcccttcttctaag
tgggttcacccagaaaatgcagttaatgctgaagcttcattaaggaggaattctcccagt
ccttggctacatcaacccactcctgtgacctcagcagatggtattggattacttagtcac
attcctgtcagaccttccagtgcagagcctcatcgacctcacaagattacagtgcattcc
agtcccccactgacaaagacattagcagatcaccacaaagaagaattggagaggaaagct
tttatggaaccattacggtctaatgcatccacatcagtaaaaggtgacctggatcttaat
aggtcacaggcaggaaaagattgtcacttgcataggcattttgtgggtccaaggccaccc
caggagactggagagagactgaacaaatacaaggaggaacatcgtcggattcttcaggaa
agtattgatgtggctccatttacaaccaaaatcaagggccatgaggtcgaaagagagaat
tactccagagtagtgccatcgtcttctagtcctaaaagccatgctatcaaacaagataaa
gacgtagaccgctccgtgtcagagatttataagatgaagcactcagtgcctcagagtttg
ccccaaagtaactacttcactactttatctaatagtgtggtcaatgagccaccaagatcc
tacccatccaaagaagtttccaacatttacactgagaaacaaaataataacctttctgca
acagccaatcctcaaactcattcttttatatcatctctttcgaagcctccacctttgatt
aaacaccaaccagaaagtgaaagtttagtgggcaagataccagaccatcttccccatcag
agtgcatctcactcagtaacaacgttcagaagtgattgtcgaagccctacccatctgact
gtttcttctactaatgcactccgcagcatgcctgctctgcacagggcaccagtattccat
ccaccaatccaccacagtttggaaagaaaggaaagcagctacagtagcctttcccctcca
actctgacaccggtaatgccggtaaatgctggtggcaaagttcaagaatctcagaagcct
ccaactctaattcctgagccaaaagactctcagtcaaattttaagaattcttctgatcag
agtctaacggaaatgtggagatctaataacaacctcaacagagagaaagctgagtggccc
gtggaaaagagtagtggaaagtcccaggctgctgtggcatctgtcattgttcgtccacct
tctagtacaaaagttgatagtgtgccatctgtaccattagcttccaaagatcgagtttgt
gaaagatcttcatctggggcaaataaaacagattacctcaaaccagaagccggagagact
ggaagaattattctaccaaatgtgaatttagaaagtgctcatgtgaaatctgaaaaaaac
tttgaagttgtctcccagggcaatgttcctgtttcagtcatgtctgctgtaaatgtagtc
tctactaccaaaacagatgtgttcacatctgctgccactaccaccagtgtctccagcttg
ggtagtgcagaaacaatttattctttatcaaataccatttcggcctctacacccttagaa
tgtacttcttcaaaaaatgttagtcagtcagtggcgcaagcaaaggattgcaaagtcagc
accgcagttccagtcactctggcctgtagtaagacaggaagtggtgttcagcctggctct
ggcttctcaggcacaactgattttattcatttaaaaaagcacaaggcagcattggctgca
gctcagtttaaaaatagtaatgtcagtgaggctgaacttaatactgtgagaaatcagaca
gtggcagcctctcttcccctggatagcaccatgacctgcactgcaagtaacaaagcaatc
tctgtaggaaatgggccagcagcccagcccagtcagcccaactaccacactaaactgaag
aaggcctggctcaccagacattcagaagaagataaaaatactaataaaatggaaaattca
gggaattctgtatcagaaattattaagccatgttctgttaacttaatagcctctacatct
aatgatatacaaaatagtgtagatgggagagtcgctgtagataaatatggaagagatgag
aaagtcagcaggagaaaagccaagagaacttacgaatctggctctgaaagtggagactca
gacgagagcgaaagcaagtcggagcagaggactaaacggcagcctaagccaacttataaa
aagaagcagaacgacctgcagaagaggaaaggcgaggtcgaagaggactcaaagcccaat
ggagttctcagcaggagcgccaaggacaaaagtaaactgaagttgcagaacagtaatagt
gctggcattcctcgttcagtgttgaaagactggcgaaaagtcaagaagctgaagcaaact
ggagaatcctttttgcaggatgactcttgctgtgagataggtcccaacttacaaaagtgc
cgagagtgtagactcatccgtagtaagaagggggaagaatcaactcattcaccggtgttt
tgtagattttactactttaggagattgtcctttagtaagaatggagtagtcagaatagat
ggtttctcttctcctgatcaatacgatgatgaagccatgagtttatggacccatgaaaat
tatgaagatgatgaagtagatgttgaaacctctaagtatatcttggacataataggtgat
aagttctgtcagttagtaacatctgaaaaaacagctttgtcctgggtgaaaaaggatgcc
aaaattgcatggaaaagggcagttcgaggtgtccgggagatgtgcgatgcatgcgaggcc
acgctgttcaatgtccactgggtctgccgcaagtgtggatttgtggcttgcttggactgt
tacaaggccaaggaaaggaagagttctagagataaagagctgtatgcttggatgaagtgt
gtgaaaggccagccccatgaccataagcatctgatgccgactcagattatccctggctct
gtgttgacagaccttcttgatgccatgcacattcttagggaaaaatatggtattaaatcc
cattgtcactgtacaaacagacagaatttacaaggtggaaatgttcctacaatgaatggt
gtgtctcaagttctacagaatgttcttcaccacaataataaaacttctgtgtgcctgcct
gagtctcagcagcagaacacccctcagaaatctcagactaatggcaacagtagccctgga
agttctagcacagatagcaggttgacacctccagagtcccagtcaccactgcactggcta
gctgatcttgctgagcaaaaatccagagaggaaaaacaagaaaacaaagaatttactctt
gaaagggaaatcaaagaagatggagaccaagatgcctctgattctccaaatggcagcaca
tcacctccagcatcccagagcaacgaacagggttcaaccctacgtgatttgctgactaca
acagctggcaagcttcgagtgggctctacagacgctggcattgcctttgcgccagtatat
tcaatgggagcctcaagtggcaaaggtggccggactatgcctaacattcttgatgacatc
attgcttcagttgttgaaaacaaaattccaccaaataaaacctccaagatcaatataaaa
tcagagcctcatgaagaacccaaagaaagcagtctgcctgccacggacgaaagcaataag
tcttatcgtgacataccacattcttggatctgtgaccagcatattttatggcttaaagat
tacaagaatagtaataactggaagcttttcaaagagtgctggaaacaaggacagcctgca
gtggtttccggtgtgcataagaaaatgaacattagcttgtggaaggcagaatcaattagt
ctggattttggagaccaccaagctgatctcctcaactgcaaagacagcattgtttccaat
gccaacgttaaggagttctgggatggttttgaagaagtgtcaaaacgtcaaaaaaacaaa
ggtggagaaacagtagtattaaaattgaaagactgcccatctggggaagacttcaagacc
atgatgccaacaagatatgaagactttttaagatgtctgccattgccagaatattgcaac
ccagaagggaaattcaatttggcctcccatttgccagggttctttgtacgccctgatcta
ggacccaggctgtgcagtgcctatggtgttgctgctgctaaggatcatgatataggaacc
acaaatcttcacattgaagcttctgatgttgtcaatgtcctagtctatgtcggcatagca
aaaggaaatggcgtcctctcaaaagcaggaatacttaagaaatttgaagaagaagaatta
gatgatgttttaagaaaaagattaaaggattcaagtgaaatccctggtgctctatggcat
atttatgctggaaaagatgttgacaagataagggaatttcttcaaaagatttcaaaagaa
caaggccttgaagttctgccagagcatgatccaatccgggaccaaagctggtatgtgaat
agaaagctccgccagagactgcttgaggaatatggggtgagagcctgcactctgattcag
ttccttggtgatgccattgttttgccagcaggaacacttcaccaggtacaaaattttcac
agctgtattcaggtgaccgaagattttgtctctccagaacatcttgtacagtcgtttcac
ttaacacaggagctgaggcttttgaaggaagaaatcaattacgacgataaactccaggtt
aagaatatcttgtaccatgcagtcaaggaaatggtgagagctttgaagatgcatgaagat
gaagtagaggatatggaagacacctaa
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integrated database retrieval system
