Mus caroli (Ryukyu mouse): 110305272
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Entry
110305272 CDS
T05910
Symbol
Synrg
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110305272 (Synrg)
Membrane trafficking [BR:
mcal04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
110305272 (Synrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
110305272
NCBI-ProteinID:
XP_021032817
Ensembl:
MGP_CAROLIEiJ_G0016889
UniProt:
A0A6P5QQS9
LinkDB
All DBs
Position
11:79207512..79284734
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AA seq
1348 aa
AA seq
DB search
MKASSKCSFMFPVAGGMRPPQAGLIPMQQQGFPMVSVMQPNMQGMMGMNYSSQMSQGPIA
MQAGIPMGPMPAAGVPFLGQPPFLSMRPAGPQYTPDMQKQFAEEQQKRFEQQQKLLEEER
KRRQFEEQKQKLRLLSSVKPKTGEKNRDDALEAIKGNLDGFSRDAKMHPTPASHPKKQDC
PTSSHSTKTVSSSSSSAFPGEDEFSGFVQGPVELPTCGSSSTAPPFQSFLPSTPLSQLHT
QKAGAQPLPPAQAPVSFAVHGVHGQIPCLSAASASHSVQKAGPSLEEKLLVSCDIRASGQ
EHIKLNTPDAGHKATVPGSSNNCPGLMAHNRVAVDGCVSGPASAEAEKTSDQTLSKEESG
VGVFPSQDPAQSRMPPWIYNESLVPDAYKKILETTMTPTGIDTAKLYPILMSSGLPRETL
GQIWALANRTTPGRLTKEELYTVLAMVAVTQRGVPAMSPDALSQFPAAPIPTLSGFPMTL
PTPVSQPTAMPSGPASSMPLTLGQPIMGINLVGPVGGAAAPTSSGFMPAYPSNQVGKTEE
DDFQDFQDASKSGSIDDSFTDFQEMPASSKNSNSQHGNSAPSLLIPFPGTKASTDKYAVF
KGISTDKPSENPASFGESGDKYSAFRELEQTTDSKPLGESFAEFRSTGTDDGFTDFKTAD
SVSPLEPPTKDTFPSAFASGAAQQTQTQVKTPLNLEDLDMFSSVDCSGEKQVPFSATFST
AKSVSTRPQPAGSAAASAALASTKTSSLADDFGEFNLFGEYSNPASAGEQDDFADFMAFG
NSSISSEPKAGDKYEALREEVSPGPLSSSTVEGAQHPPAAATKYDVFKQLSLEGTGLAME
EFKENTSSTKSDDDFADFHSSKFSSTSSDKSLGEKAVAFRHAKEDSSSVKSLDLPSIGGS
SVGKEDSEDALSVQFDMKLADVGGDLKHVMSDSSLDLPTVSGQHPPAAAGSRSFSATSNL
HTKEISFGSSENITMSSLSKGSALASEDALPETAFPAFASFKDMMPQTTEQKEYESGDFQ
DFTRQDTPMVDRSQETSCPSPASSVASHETPKEAADDFGEFQSEKPKISKFDFLVANSQS
KMKSSEEMIKSELATFDLSVQGSHKRSLSLGDKEISRPSPSPALEQPFRDRSNTLSERAS
LPVIRDKYKDLTGEVEENERYAYEWQRCLGSALDVIKKANDTLNGISSSAVCTEVIQSAQ
GMEYLLGVVEVYRVTKRVELGIKATAVCSEKLQQLLKDIDKVWNNLIGFMSLATLTPDEN
SLDFSSCMLRPGIKNAQELACGVCLLNVDSRSRKEETPAEEQPKKAFNSETDSFKLAYGG
HQYHASCANFWINCVEPKPPGLLLPDLL
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccagcagcaaatgtagcttcatgtttcctgttgcaggcggaatgagacctcct
caagcaggcctgattccaatgcaacagcaaggattccctatggtctctgtcatgcagccc
aatatgcaaggcatgatgggaatgaattacagctctcagatgtcccaaggacccattgca
atgcaggcaggaataccaatggggccaatgccagcagcgggtgtgcctttcctgggtcag
ccacctttcttgagcatgcgtcctgcaggcccacagtacactccagacatgcagaagcaa
tttgcggaagagcaacaaaaacgatttgaacaacaacaaaagctcttagaagaagaaaga
aaaagacgtcagtttgaggagcaaaagcaaaagctcagacttctcagcagcgtgaagccc
aagacaggagagaagaacagagacgatgctttggaagccataaaaggaaacttggatggg
ttttccagagatgctaagatgcaccccactccagcatcacatccaaagaaacaagactgc
cccacatcatctcattctactaaaactgtctcctcatcatcatcatctgcctttcccggc
gaagacgaattcagtggctttgtgcaggggcctgttgagcttcccacttgcgggtcttct
tccacagccccgccctttcagtctttcctccccagcaccccactcagccagttacacaca
cagaaggctggggcacagcctctgcctccagctcaggctccagtgtcttttgccgtacat
ggtgtccatgggcaaattccttgtttatctgctgcttcagcttcccacagtgtgcagaaa
gcaggcccttccttggaagagaagctcctagtgtcttgtgatatacgtgcatctgggcag
gaacacattaaattaaacactcctgatgctgggcacaaagccacagtcccaggatccagt
aacaactgccctggtttaatggcccataacagggttgctgtggatggatgtgtgagtggt
cccgccagtgcagaggcagaaaagacttcagatcaaaccctgtcaaaggaagagagtggt
gtgggcgtgtttccctctcaggaccctgctcagtccagaatgcctccttggatttacaat
gagagtttggttccagatgcctataagaaaattttagaaaccacaatgactccaactgga
atagatactgctaaactttatcccattctgatgtcatctggacttcccagggaaactctc
ggacagatatgggccttagctaatcgaaccacaccgggcaggctcactaaggaggagctt
tacacggttctcgccatggtagcagtgacacagaggggtgttcctgccatgagccctgat
gctttgagccagttccctgcggctcccatccctaccttaagcggctttcctatgactctg
cctaccccagtgagccagccaacagcgatgccctctggccctgcaagctccatgcccctc
acccttggacagcccatcatgggtatcaaccttgttggaccagtgggtggagctgcagcg
ccaacttccagtggcttcatgccagcctacccatcaaaccaggtgggaaagacagaagaa
gatgacttccaggattttcaagatgcttcaaaatcaggatccatcgatgattctttcact
gatttccaagagatgcctgcttcctcaaaaaacagtaattcccagcatggaaacagtgct
ccatcactcttgatcccatttcctggaactaaagcctccacagacaaatacgcagtgttc
aaaggcatttccactgacaagccctctgaaaaccctgcttcgtttggagagtctggtgat
aaatacagtgctttcagggaactcgagcaaacgacagacagtaaacctttaggagagagc
tttgctgagttccgatccacaggaaccgatgatggcttcactgacttcaagaccgccgat
agtgtgtcacccctagagccacccacaaaagacacttttccatcagcttttgcctcagga
gctgcacagcagacacagacacaggtgaaaacccctctgaacttagaagacctagatatg
ttctcctcagtggattgcagtggcgagaaacaggtgcccttttcagctacatttagcaca
gcaaagtcagtttccactcgacctcagccagcgggctctgcagcagcctcagcagcactg
gcatccactaaaacttctagtttggcagatgattttggagagttcaacctctttggggaa
tattccaaccctgcatctgctggggagcaggacgactttgcagattttatggctttcggt
aacagctccatttcatctgagccaaaagcaggtgacaagtatgaagccctcagggaggaa
gtgagtcccggccccttgtccagcagcactgtggaaggggcacagcacccacctgctgca
gcaaccaagtatgatgtcttcaaacagctgtccctagagggcactgggctggccatggag
gagttcaaagagaacacttcttccaccaagagtgacgatgactttgccgacttccactcc
agtaaattctcatccacgagctcagacaaatccctgggagagaaagctgtggctttcaga
catgccaaagaagactcctcctcggtgaagtctttagacctcccctccatcggtggcagc
agtgttggcaaggaggactctgaagatgcactttctgttcaatttgacatgaaattggct
gatgtgggaggagatcttaagcatgtcatgtctgatagctctttggatttaccaacagtt
agtggccagcatcctcctgccgcagcaggaagtaggtccttttcggccacctcaaacctt
cacacgaaagagatctcatttggcagttctgaaaacatcaccatgtcatctctctccaaa
ggatcggccttggccagtgaggacgctcttccagagactgccttcccagcttttgccagc
tttaaagacatgatgcctcagaccactgagcagaaagagtatgaaagcggggacttccag
gatttcaccaggcaggacacgcccatggtggaccgcagccaagaaacctcatgtccaagc
ccagcttccagtgtggcctcgcacgagacccccaaggaggctgcagacgactttggagaa
tttcaaagtgaaaagcccaaaatcagcaagtttgacttcttagtagctaattcccagagc
aaaatgaaatccagtgaagaaatgatcaaaagtgagctggcaacctttgacctttctgtt
caaggatcacacaagaggagcttgagccttggggataaagaaataagccggccctctcct
tccccggccctggagcagcccttcagagaccggtccaacactctgagtgagagggcttcg
ctgcccgtcatccgagacaagtacaaggatctgactggcgaggtggaggaaaatgagaga
tatgcgtatgagtggcagagatgcctagggagcgccctggatgtcattaagaaggcaaat
gacaccttaaacggcattagcagcagtgctgtttgcacagaagttatccagtcagctcaa
ggcatggagtatcttctaggtgtggtggaagtataccgtgtaaccaagcgtgtggagctg
ggcataaaagccactgcggtgtgcagtgagaaactccagcagttgctgaaggacatcgat
aaagtgtggaacaacttaatcggcttcatgtcacttgccacactcacaccagatgagaat
tcactggatttttcctcctgtatgttacggcccgggatcaaaaacgctcaggagctggct
tgtggagtgtgtctcttaaatgtggactccaggagccggaaagaagagacgcctgcagaa
gaacagcctaaaaaagcattcaactcggagacagacagcttcaagctggcctacggaggt
caccagtaccacgccagctgtgccaacttctggatcaactgtgttgaacccaagcctccc
ggcctcctcttgccggatctgctctga
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