Mus caroli (Ryukyu mouse): 110308161
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Entry
110308161 CDS
T05910
Symbol
Rnf180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110308161 (Rnf180)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110308161 (Rnf180)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110308161 (Rnf180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110308161
NCBI-ProteinID:
XP_021036201
Ensembl:
MGP_CAROLIEiJ_G0018869
UniProt:
A0A6P5QWW3
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All DBs
Position
13:complement(98658717..98825908)
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AA seq
592 aa
AA seq
DB search
MKRSKESTSTQSPEEQIGTLHCWRCRKCIASSGCFMSPLETQVVEQDRHESVDAQNTCHL
WHMNVDALPEWISCLLQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAAVHLCKSR
TDHQAAQAGRLTRPALKRLPRPGVPSGCDKDTLLTGGGSKTRNHRLLSMARNSHGLGRLT
EALCLEVRATYFEMKNEKLLFKASDPKCQPFVPQPDTGRCPSRASHRKSHSLDLNISEKL
ILLPTLYEIHSKPTAYPRLNETGPIDLSGLALPCSNSSCSFQSSPSFDPNMLLHRLSVAP
HETQAQRGREFQCGLEASSVYSDHANANSLPFLMDLPSAGRSVLEASDQEEHLSPLDFLR
SASFPLGTINHRLNNRERSKLRTLRRQQRRERWLQKQGKYSGVGLLDHMTVSNEMNTDED
TEFPEEKDSYMCAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRV
FLQTELNNATKTFFTKEYLKIKQSFQKSSSAKWPLPSCRKGFHLFGGFHRRAAPVTRRQF
PHGAHRMDYLHFEDDSRGWWFDMDMVIIYIYSVNWVIGFVVFCFLCYFFFPF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaagcaaagagtcgacaagtacgcagagccccgaggagcaaataggcaccctt
cattgttggagatgtagaaaatgcattgcaagttctggttgcttcatgagtcctcttgag
actcaagtggttgagcaggacagacatgaatcagttgatgctcaaaacacctgtcacctg
tggcacatgaatgtagatgcccttccggagtggatcagctgcctgctgcagaaggcccag
tggacagttgggaaactgaattgtcctttctgtggggcccgattagggggctttaatttt
gtcagcactccaaaatgttcctgtggccagcttgcagctgtacatctctgcaagagccgg
actgatcaccaggcggcacaggcaggcagactaacgagaccagcgctgaaacgtttgcca
cgtcccggagtcccttcaggttgtgataaggacactctactgacaggtggcggctccaaa
accagaaaccaccggcttttaagcatggcccgaaacagccacggccttggaagacttaca
gaagcactctgcctggaggtgcgagcgacgtattttgagatgaagaatgaaaaactactc
ttcaaagcatcggacccaaaatgccagccttttgttcctcagcctgacaccggcaggtgt
ccttcaagagcgtctcacagaaagtcacacagtttggacctgaacatcagtgagaagctg
attttattacccactttatatgaaatacatagtaagcctactgcctatcccaggctaaat
gaaacgggacccattgacctttcaggcttggctttaccgtgtagtaacagtagctgctcc
tttcaaagctcacctagttttgatcctaatatgctgctgcacagactttcagtggctccc
catgagacccaggcacaaaggggaagagaattccagtgcggcctagaagcttcttcagtc
tactcagatcacgctaacgctaacagcctgccattcctgatggatctgccctcagcgggg
aggagcgtgctggaggcctcggaccaagaagagcacctctccccgctggacttcctgcgc
tctgccagcttccccttgggcaccattaaccacaggctgaacaacagagagagaagcaag
ttgaggactctgcgaaggcagcaaaggcgcgaacgatggctacagaagcagggtaaatac
tcaggagtgggcttgctggatcacatgaccgtgagtaatgagatgaatacagatgaggac
actgagttcccagaggagaaggacagctacatgtgtgcagtgtgcctggatgtgtacttc
aacccctacatgtgctatccctgccaccacatcttctgcgagccctgcctacgaactctg
gccaaagacaaccccgcaagcactccctgcccactgtgccggacaattatttctagagtc
tttctccagacagaactgaacaatgccacaaagacattctttactaaagaatatttgaaa
atcaagcaaagctttcagaaatccagctctgcaaagtggcccttgccgagctgcaggaaa
ggattccatctcttcggaggattccacaggcgcgctgccccagtgacacggaggcagttc
ccacacggcgcccacaggatggactacctgcacttcgaggacgacagccgtggatggtgg
tttgacatggatatggtgatcatctatatttattcagtgaactgggtcattggattcgtt
gttttctgctttctttgctattttttctttccgttttag
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