Mus caroli (Ryukyu mouse): 110309049
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Entry
110309049 CDS
T05910
Gene name
Irf9
Definition
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 9
KO
K04693
interferon regulatory factor 9
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04217
Necroptosis
mcal04380
Osteoclast differentiation
mcal04621
NOD-like receptor signaling pathway
mcal04625
C-type lectin receptor signaling pathway
mcal04630
JAK-STAT signaling pathway
mcal05160
Hepatitis C
mcal05162
Measles
mcal05164
Influenza A
mcal05165
Human papillomavirus infection
mcal05167
Kaposi sarcoma-associated herpesvirus infection
mcal05168
Herpes simplex virus 1 infection
mcal05169
Epstein-Barr virus infection
mcal05171
Coronavirus disease - COVID-19
mcal05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
110309049 (Irf9)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
110309049 (Irf9)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110309049 (Irf9)
04625 C-type lectin receptor signaling pathway
110309049 (Irf9)
09158 Development and regeneration
04380 Osteoclast differentiation
110309049 (Irf9)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110309049 (Irf9)
09172 Infectious disease: viral
05160 Hepatitis C
110309049 (Irf9)
05171 Coronavirus disease - COVID-19
110309049 (Irf9)
05164 Influenza A
110309049 (Irf9)
05162 Measles
110309049 (Irf9)
05168 Herpes simplex virus 1 infection
110309049 (Irf9)
05167 Kaposi sarcoma-associated herpesvirus infection
110309049 (Irf9)
05169 Epstein-Barr virus infection
110309049 (Irf9)
05165 Human papillomavirus infection
110309049 (Irf9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110309049 (Irf9)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
110309049 (Irf9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
110309049
NCBI-ProteinID:
XP_021037072
Ensembl:
MGP_CAROLIEiJ_G0019303
UniProt:
A0A6P5QS26
LinkDB
All DBs
Position
14
AA seq
463 aa
AA seq
DB search
MHLPGGELKLRVGTVERGGEIRKSLEPAEPGTSSAAQALPTSSAPPLPPAAAPPTPLAKR
GLVRRRMASGKVRCTRKLRSWIVQQVESGHFPGVCWDDADKTMFRIPWKHAGKQDFREDQ
DAAIFKAWALFKEKHKDGDIGHPAVWKTRLRCALNKSSEFEEVPERGRMDVAEPYKVYRI
LPAGTPPNQPRNQKSPCKRSISCVSPEREENTENGRTNGVVNHSDSGSNIGGGGNGSNRS
DSNSNSELEEGAGTTEATIREDPVFLEHQLPLNSDYSLLLTFIYGGRVVGKTQVHSLDCR
LVAERSDSESSMEQVEFPKPDPLEPTQRLLSQLERGVLVASNSRGLFVQRLCPIPISWNA
PEAPPGPGPHLLPSNKCVELFKTTYFCRDLAQYFQGQGPPPKFQATLHFWEESPGSSHSQ
ENLITVQMEQAFARHLLEKIPEEEKAALFLLHHTEQSPSALGL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcacctccccggaggagaactgaaacttagggtggggactgtagaaaggggaggagag
atcagaaaaagcctagaaccagctgagcctgggacctcctcagcggctcaggccctgccc
acttcttcagctccgcccttgcccccagctgccgccccacctacccctctagcaaagagg
ggtttggtaaggagaaggatggcctcaggcaaagtacgctgcacccgaaagctgcggagc
tggatcgtgcagcaggtggagagtggccatttcccaggggtgtgctgggacgatgcagac
aagaccatgttccggatcccctggaagcacgcgggcaagcaagacttccgagaggaccag
gatgctgccatattcaaggcttgggcactgtttaaggaaaagcacaaagatggggacata
ggacacccggctgtctggaagactcgcctacgctgtgccctcaacaagagttctgaattt
gaagaggttcctgagagaggtcgtatggatgttgctgaaccctacaaagtatatcgaata
ctgccagcaggaaccccccctaaccaaccacggaaccagaaatcaccatgcaagcgaagt
atcagttgtgtgtcacctgagagggaagaaaatacggaaaatgggaggaccaatggagtt
gtaaaccactcagacagtggcagcaacataggcggtggtggcaatggcagcaacaggagc
gacagcaacagcaactctgagctagaggagggagctggcacaactgaggccaccattaga
gaggacccagtgttcctggagcatcaacttcctctgaactcagactattcgctgctgctc
accttcatctatggtggccgagtggtgggtaagacccaggtgcacagcctagactgtcgg
ctcgtggctgagcgctcagactcagagagcagcatggagcaggtggagtttcccaaaccc
gacccactggagcctacccagcgcctgctgagtcagcttgagagaggcgtcctggtggcc
agcaattccagaggcctctttgttcagcgcctttgccccatccccatctcctggaacgca
cccgaggccccacccgggcctggtcctcatctgctgcccagcaataagtgtgtggagctc
ttcaagaccacctacttctgtagagatttggcccagtacttccagggccagggcccccca
cccaagttccaagcaaccctacatttctgggaggagagtcctggctctagccatagccaa
gagaatctcatcacagtgcagatggagcaggcctttgcccgacatttactggagaagatt
ccagaggaggaaaaagctgccttgttcctgttacaccacacagagcagtcaccctctgct
ctcggtctctga
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