Mus caroli (Ryukyu mouse): 110309179
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Entry
110309179 CDS
T05910
Gene name
Rb1
Definition
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal01522
Endocrine resistance
mcal04110
Cell cycle
mcal04218
Cellular senescence
mcal04934
Cushing syndrome
mcal05160
Hepatitis C
mcal05161
Hepatitis B
mcal05163
Human cytomegalovirus infection
mcal05165
Human papillomavirus infection
mcal05166
Human T-cell leukemia virus 1 infection
mcal05167
Kaposi sarcoma-associated herpesvirus infection
mcal05169
Epstein-Barr virus infection
mcal05200
Pathways in cancer
mcal05203
Viral carcinogenesis
mcal05212
Pancreatic cancer
mcal05214
Glioma
mcal05215
Prostate cancer
mcal05218
Melanoma
mcal05219
Bladder cancer
mcal05220
Chronic myeloid leukemia
mcal05222
Small cell lung cancer
mcal05223
Non-small cell lung cancer
mcal05224
Breast cancer
mcal05225
Hepatocellular carcinoma
mcal05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110309179 (Rb1)
04218 Cellular senescence
110309179 (Rb1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110309179 (Rb1)
05203 Viral carcinogenesis
110309179 (Rb1)
09162 Cancer: specific types
05212 Pancreatic cancer
110309179 (Rb1)
05225 Hepatocellular carcinoma
110309179 (Rb1)
05226 Gastric cancer
110309179 (Rb1)
05214 Glioma
110309179 (Rb1)
05220 Chronic myeloid leukemia
110309179 (Rb1)
05218 Melanoma
110309179 (Rb1)
05219 Bladder cancer
110309179 (Rb1)
05215 Prostate cancer
110309179 (Rb1)
05224 Breast cancer
110309179 (Rb1)
05222 Small cell lung cancer
110309179 (Rb1)
05223 Non-small cell lung cancer
110309179 (Rb1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
110309179 (Rb1)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110309179 (Rb1)
05161 Hepatitis B
110309179 (Rb1)
05160 Hepatitis C
110309179 (Rb1)
05163 Human cytomegalovirus infection
110309179 (Rb1)
05167 Kaposi sarcoma-associated herpesvirus infection
110309179 (Rb1)
05169 Epstein-Barr virus infection
110309179 (Rb1)
05165 Human papillomavirus infection
110309179 (Rb1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
110309179 (Rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcal01009
]
110309179 (Rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110309179 (Rb1)
Protein phosphatases and associated proteins [BR:
mcal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110309179 (Rb1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
110309179 (Rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
RuvC_1
FAM75
Motif
Other DBs
NCBI-GeneID:
110309179
NCBI-ProteinID:
XP_021037313
Ensembl:
MGP_CAROLIEiJ_G0019499
UniProt:
A0A6P5QZ69
LinkDB
All DBs
Position
14
AA seq
922 aa
AA seq
DB search
MPPKAPRRAAAAEPPPPPPPPPPREDDPAQDSGPEELPLARLEFEEIEEPEFIALCQKLK
VPDHVRERAWLTWEKVSSVDGILEGYIQKKKELWGICIFIAAVDLDEMPFTFTELQKSIE
TSVYKFFDLLKEIDTSTKVDNAMSRLLKKYNVLCALYSKLERTCELIYLTQPSSALSTEI
NSMLVLKISWITFLLAKGEVLQMEDDLVISFQLMLCVVDYFIKFSPPALLREPYKTAAIP
INGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHKCNIDEVKNVYFKNFIPFINSLGI
VSSNGLPEVESLSKRYEEVYLKNKDLDARLFLDHDKTLQTDPIDSFETERTPRKNNPDEE
ANVVTPHTPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILKRVKDVGHI
FKEKFANAVGQGCVDIGVQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMS
LLACALEVVMATYSRSTLQHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTRE
MIKHLERCEHRIMESLAWLSDSPLFDLIKQSKDGEGPDNLEPACPLSLPLQSNHTAADMY
LSPLRSPKKRTSTTRVNSAANTETQAASSFHTQKPLKSTSLSLFYKKVYRLAYLRLNTLC
ARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVT
AYKDLPHAAQETFKRVLIREEEFDSIIVFYNSVFMQRLKTNILQYASTRPPTLSPIPHIP
RSPYKFSSSPLRIPGGNIYISPLKSPYKISEGLPTPTKMTPRSRILVSIGESFGTSEKFQ
KINQMVCNSDRVLKRSAEGGNPPKPLKKLRFDIEGADEADGSKHLPAESKFQQKLAEMTS
TRTRMQKQRMNESMDVSNKEEK
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaaagccccgcgcagagccgcggccgccgagcccccgccaccgccgccgccg
ccgccgcctcgggaggacgaccccgcgcaggacagcggccccgaagagctgcccctggcc
aggcttgagtttgaagaaattgaagaacccgaatttattgcattatgtcagaagttaaag
gtaccggatcatgtcagagaaagagcttggctaacttgggagaaagtttcatccgtggac
ggaatcctggaaggatatattcaaaagaagaaggaactctggggcatctgcatctttatc
gcagcagttgatctagatgagatgccattcactttcactgagctacagaaaagcatagaa
accagtgtctataaattctttgacttattaaaagaaattgataccagtaccaaggttgat
aatgctatgtcaagactattgaagaagtataatgtgttatgtgcactctacagcaaatta
gaacggacatgtgaacttatatatttgacacaacccagcagtgcgttatctactgaaata
aattctatgttggtgctaaaaatttcttggatcacttttttactagctaaaggagaagta
ttacagatggaagatgacctggtaatctcatttcagctaatgttgtgtgtagttgactat
tttattaagttctcgcctcctgcactactcagagagccatacaaaacagctgcaatcccc
attaatggttcgcctcgaacacccagaagaggtcagaacaggagtgctcggatagcaaaa
caactagaaaatgatacgagaattatcgaagttctctgtaaagaacacaagtgtaatata
gatgaggtgaaaaatgtttatttcaaaaattttatcccttttataaattcacttggaatt
gtatcatctaatggacttccagaggttgaaagtctttctaaacgctatgaagaagtttat
cttaaaaacaaagatttagatgcaagactatttttggatcatgataaaacacttcagact
gatcctatagacagttttgaaacagagagaacgccacgaaaaaacaaccctgatgaagag
gcaaacgtggttactccacacactccagttaggactgttatgaatactattcaacaatta
atggtgattttaaattctgcaagtgatcagccatcagaaaatctgatttcctacttcaat
aattgcacagtgaatccaaaagaaaatatcctaaagagagtaaaggatgttgggcacatc
tttaaagagaagtttgctaacgctgtgggccagggctgtgttgacatcggagtacagcga
tataaacttggagtccgattgtattaccgtgtgatggaatccatgcttaaatcagaagaa
gaacgtttgtccattcagaattttagcaaactcctaaatgacaacatctttcatatgtct
ttattggcctgtgctcttgaagttgtaatggctacgtatagcagaagtacattacagcat
cttgattctggaacagatttgtccttcccgtggattctgaatgtacttaatttaaaagcc
tttgatttttacaaagtgattgaaagttttatcaaagtggaagccaacttgacaagagaa
atgataaaacatttagaaagatgtgagcatcgaatcatggaatcccttgcatggctttca
gattcacctttatttgatctcattaagcagtccaaggatggagaaggacctgataacctt
gaacctgcttgtcctctcagcctccctctccagagtaaccatactgcagcagatatgtat
ctttctcctctaagatctccaaagaaaagaacttccactacacgtgtaaattctgctgca
aatacagagacacaagcagcctcatccttccatactcagaagccattgaaatctacctcc
ctttccctgttttacaaaaaagtgtaccgtctagcatatctccgactaaatacactctgt
gcacgccttctgtctgaccacccagagctagagcacatcatctggaccctgtttcagcat
acattgcaaaatgagtatgagctcatgagagaccggcatttggaccagattatgatgtgc
tctatgtatggcatctgcaaggtgaagaatattgaccttaagttcaaaatcatcgtaact
gcgtacaaggatcttcctcacgctgcccaggagacctttaaacgtgttttgatcagagaa
gaggagtttgattccattatagtattctataactcagttttcatgcagagactaaaaaca
aatattttacagtatgcctccaccaggcctcctaccttgtcaccaatacctcacattcct
cgaagcccttacaagttttctagttcacccttacggattcctggaggtaacatctatata
tcacccctaaagagtccttataaaatttcagaaggtctgccaacacccacaaaaatgact
ccgagatcaagaatcttggtctcaattggtgaatcatttgggacatctgagaagttccag
aaaataaaccagatggtgtgtaatagtgacagagtgctcaaaagaagtgctgaaggcggc
aacccccccaaaccactgaaaaagctgcgctttgacatcgagggagccgatgaagcagat
gggagtaaacatctcccagcggagtccaaattccaacagaaactggcggaaatgacttcc
actcgaacacgaatgcaaaagcagagaatgaatgagagcatggatgtctcaaacaaggag
gaaaagtga
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