Mus caroli (Ryukyu mouse): 110310487
Help
Entry
110310487 CDS
T05910
Symbol
Cd44
Name
(RefSeq) CD44 antigen isoform X2
KO
K06256
CD44 antigen
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04512
ECM-receptor interaction
mcal04640
Hematopoietic cell lineage
mcal05169
Epstein-Barr virus infection
mcal05205
Proteoglycans in cancer
mcal05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110310487 (Cd44)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
110310487 (Cd44)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110310487 (Cd44)
05205 Proteoglycans in cancer
110310487 (Cd44)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110310487 (Cd44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcal04147
]
110310487 (Cd44)
04090 CD molecules [BR:
mcal04090
]
110310487 (Cd44)
00535 Proteoglycans [BR:
mcal00535
]
110310487 (Cd44)
00536 Glycosaminoglycan binding proteins [BR:
mcal00536
]
110310487 (Cd44)
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110310487 (Cd44)
Exosomal proteins of other body fluids (saliva and urine)
110310487 (Cd44)
Exosomal proteins of colorectal cancer cells
110310487 (Cd44)
Exosomal proteins of bladder cancer cells
110310487 (Cd44)
CD molecules [BR:
mcal04090
]
Proteins
110310487 (Cd44)
Proteoglycans [BR:
mcal00535
]
Cell surface proteoglycans
Others
110310487 (Cd44)
Glycosaminoglycan binding proteins [BR:
mcal00536
]
Hyaluronan
Cell surface receptors
110310487 (Cd44)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Motif
Other DBs
NCBI-GeneID:
110310487
NCBI-ProteinID:
XP_021039148
Ensembl:
MGP_CAROLIEiJ_G0024011
UniProt:
A0A6P5R3B5
LinkDB
All DBs
Position
2:complement(96114097..96203115)
Genome browser
AA seq
778 aa
AA seq
DB search
MDKFWWHTAWGLCLLQLSLAQQQIDLNVTCRYAGVFHVEKNGRYSISRTEAADLCQAFNS
TLPTMDQMKLALNKGFETCRYGFIEGNVVIPRIHPNAICAANHTGVYVLNTSNTSHYDTY
CFNASAPPGEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDIDASHIIDDD
VSSGSTIEKSTPEGYIMHTYLPTEEPTGDQDDSFFIQSTLATIASTVHSKSHAAAQKQNN
WIWSWFGNSQSTTQTQEPTTRATTALMTTPETPPKRQEAQNWFSWLFQPSESKSHLHTTT
KMPGTESNTNPTGWEPNEENEDETDKYPSFSGSGIDDDEDFISSTIATTPRVSAHTEDNQ
DWTQWKPNHSNPEVLLQTTTRMADIDRISTSAHGENWTPEPQPPFNNHEYQDEEETPHAT
STTPNSTAEEAATQQETWFENGWQGKNPPTPSEDFHVTEGTTASAHNNHPSQRITTQSQE
DVSWTDFLDPISHPMGQGHQTESKDTDSSHSTTLQPTAAPNTHLVEDLNRTGPLSVTTPQ
SHSQNFSTLHGEPEEDENHPTTSILPSSTKSGAKDARRGGSLPTDTTTSVEGYTFQYPDT
MENGTLFPVTPAKTEVFGETEVTLATDSNFNVDGSLPGDRDSSMDSRGGSRSVTHGSELA
GHSSGNQDSGVTTTSGPMRRPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVI
NGGNGTVEDRKPSELNGEASKSQEMVHLVNKEPSETPDQCMTADETRNLQSVDMKIGV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttttggtggcacacagcttggggactttgcctcttgcagttgagcctggca
cagcagcagatcgatttgaatgtaacctgccgctacgcaggtgtattccatgtggagaaa
aatggccgctacagtatctcccggactgaggcagctgacctctgccaggctttcaacagc
accttacccaccatggaccaaatgaagttggccctgaacaagggttttgaaacatgcagg
tatgggttcatagaaggaaacgtggtaattccgaggattcatcccaatgctatctgtgca
gccaaccacacaggagtatatgtcctcaacacgtccaacacctcccactatgacacatat
tgcttcaatgcctcagcccctcctggagaagactgtacgtcagtcacagacctacccaat
tccttcgatggacccgttaccataactattgtcaaccgtgatggtacccgctacagcaag
aagggcgagtatagaacacaccaagaagacatcgatgcttcacacattatagatgatgat
gtcagcagcggctccaccatagagaagagcaccccagaaggctacattatgcacacctac
cttcctactgaagagcctactggagatcaggatgactccttctttatccagagcaccttg
gccaccattgcctcaactgtgcactcaaaaagccatgcagcagctcagaaacaaaataat
tggatatggtcttggtttggtaattcacagtccacaactcagactcaggagcccacaacg
agagcaactacagccttgatgaccacccctgaaacaccacccaagaggcaagaagcccag
aactggttttcatggttatttcaaccatcagagtccaagagtcatcttcatacaacaacg
aagatgcctggtacggagtcaaataccaacccaacaggctgggagccaaatgaggaaaat
gaagatgaaacagacaaataccccagtttttctggatcaggcattgatgatgatgaagat
tttatctccagtaccattgcaactactccacgggtttctgcccacacagaagacaaccag
gactggacccagtggaagccaaaccattcaaacccagaagtactacttcagacaaccacc
aggatggctgatatagacagaatcagcaccagtgctcatggagaaaactggaccccggaa
ccacagcctcctttcaataaccatgagtatcaggatgaagaggagaccccacatgctaca
agcacaactcctaatagtacagcagaagaagcagctacccagcaggagacgtggtttgag
aatggatggcaggggaagaacccccctaccccaagtgaagacttccatgtgacagaaggg
acaactgcctcggcccacaacaaccatccaagtcaaagaataacaacacagagtcaagag
gatgtttcctggacagatttcttggacccaatctcacatccaatgggacaaggtcatcaa
acagaaagcaaggatacagactccagtcatagtacaacccttcagcctactgcagctcca
aatacccatttggtggaagacttgaacaggacaggaccactttcagtgacaactccacag
agtcattctcagaacttctctacattacatggagagccggaagaagacgaaaaccatcca
acaacttctattctgccatctagcactaagagtggcgctaaagatgcaagaagaggtgga
agtcttcccacagatacaactacttctgtagaaggctacacctttcaatacccagacaca
atggaaaatgggactctcttcccagtgacccctgctaaaactgaggtctttggagaaact
gaagtgactcttgctactgactccaactttaatgttgatggctccttaccaggcgatcga
gactcatccatggactccagggggggttcccgctctgtgactcatggatccgaattagct
ggacactcaagtgggaaccaggacagtggagtgaccacaacttctggtcctatgaggaga
cctcagattccagaatggctcatcatcttggcatctctcctggcactggctctgattctt
gccgtctgcattgcggtcaatagtaggagaaggtgtgggcagaagaaaaagctggtgatc
aacggtggcaatggaacagtggaagacaggaaacccagtgagctcaacggggaggccagc
aagtctcaggaaatggtgcatttggtgaacaaggaaccatcagagaccccggaccagtgt
atgacagctgacgagacccggaatctgcagagtgtggacatgaagattggggtgtag
DBGET
integrated database retrieval system