KEGG   Mus caroli (Ryukyu mouse): 110310487
Entry
110310487         CDS       T05910                                 
Symbol
Cd44
Name
(RefSeq) CD44 antigen isoform X2
  KO
K06256  CD44 antigen
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04512  ECM-receptor interaction
mcal04640  Hematopoietic cell lineage
mcal05169  Epstein-Barr virus infection
mcal05205  Proteoglycans in cancer
mcal05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110310487 (Cd44)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    110310487 (Cd44)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    110310487 (Cd44)
   05205 Proteoglycans in cancer
    110310487 (Cd44)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    110310487 (Cd44)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mcal04147]
    110310487 (Cd44)
   04090 CD molecules [BR:mcal04090]
    110310487 (Cd44)
   00535 Proteoglycans [BR:mcal00535]
    110310487 (Cd44)
   00536 Glycosaminoglycan binding proteins [BR:mcal00536]
    110310487 (Cd44)
Exosome [BR:mcal04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110310487 (Cd44)
  Exosomal proteins of other body fluids (saliva and urine)
   110310487 (Cd44)
  Exosomal proteins of colorectal cancer cells
   110310487 (Cd44)
  Exosomal proteins of bladder cancer cells
   110310487 (Cd44)
CD molecules [BR:mcal04090]
 Proteins
  110310487 (Cd44)
Proteoglycans [BR:mcal00535]
 Cell surface proteoglycans
  Others
   110310487 (Cd44)
Glycosaminoglycan binding proteins [BR:mcal00536]
 Hyaluronan
  Cell surface receptors
   110310487 (Cd44)
SSDB
Motif
Pfam: Xlink
Other DBs
NCBI-GeneID: 110310487
NCBI-ProteinID: XP_021039148
Ensembl: MGP_CAROLIEiJ_G0024011
UniProt: A0A6P5R3B5
LinkDB
Position
2:complement(96114097..96203115)
AA seq 778 aa
MDKFWWHTAWGLCLLQLSLAQQQIDLNVTCRYAGVFHVEKNGRYSISRTEAADLCQAFNS
TLPTMDQMKLALNKGFETCRYGFIEGNVVIPRIHPNAICAANHTGVYVLNTSNTSHYDTY
CFNASAPPGEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDIDASHIIDDD
VSSGSTIEKSTPEGYIMHTYLPTEEPTGDQDDSFFIQSTLATIASTVHSKSHAAAQKQNN
WIWSWFGNSQSTTQTQEPTTRATTALMTTPETPPKRQEAQNWFSWLFQPSESKSHLHTTT
KMPGTESNTNPTGWEPNEENEDETDKYPSFSGSGIDDDEDFISSTIATTPRVSAHTEDNQ
DWTQWKPNHSNPEVLLQTTTRMADIDRISTSAHGENWTPEPQPPFNNHEYQDEEETPHAT
STTPNSTAEEAATQQETWFENGWQGKNPPTPSEDFHVTEGTTASAHNNHPSQRITTQSQE
DVSWTDFLDPISHPMGQGHQTESKDTDSSHSTTLQPTAAPNTHLVEDLNRTGPLSVTTPQ
SHSQNFSTLHGEPEEDENHPTTSILPSSTKSGAKDARRGGSLPTDTTTSVEGYTFQYPDT
MENGTLFPVTPAKTEVFGETEVTLATDSNFNVDGSLPGDRDSSMDSRGGSRSVTHGSELA
GHSSGNQDSGVTTTSGPMRRPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVI
NGGNGTVEDRKPSELNGEASKSQEMVHLVNKEPSETPDQCMTADETRNLQSVDMKIGV
NT seq 2337 nt   +upstreamnt  +downstreamnt
atggacaagttttggtggcacacagcttggggactttgcctcttgcagttgagcctggca
cagcagcagatcgatttgaatgtaacctgccgctacgcaggtgtattccatgtggagaaa
aatggccgctacagtatctcccggactgaggcagctgacctctgccaggctttcaacagc
accttacccaccatggaccaaatgaagttggccctgaacaagggttttgaaacatgcagg
tatgggttcatagaaggaaacgtggtaattccgaggattcatcccaatgctatctgtgca
gccaaccacacaggagtatatgtcctcaacacgtccaacacctcccactatgacacatat
tgcttcaatgcctcagcccctcctggagaagactgtacgtcagtcacagacctacccaat
tccttcgatggacccgttaccataactattgtcaaccgtgatggtacccgctacagcaag
aagggcgagtatagaacacaccaagaagacatcgatgcttcacacattatagatgatgat
gtcagcagcggctccaccatagagaagagcaccccagaaggctacattatgcacacctac
cttcctactgaagagcctactggagatcaggatgactccttctttatccagagcaccttg
gccaccattgcctcaactgtgcactcaaaaagccatgcagcagctcagaaacaaaataat
tggatatggtcttggtttggtaattcacagtccacaactcagactcaggagcccacaacg
agagcaactacagccttgatgaccacccctgaaacaccacccaagaggcaagaagcccag
aactggttttcatggttatttcaaccatcagagtccaagagtcatcttcatacaacaacg
aagatgcctggtacggagtcaaataccaacccaacaggctgggagccaaatgaggaaaat
gaagatgaaacagacaaataccccagtttttctggatcaggcattgatgatgatgaagat
tttatctccagtaccattgcaactactccacgggtttctgcccacacagaagacaaccag
gactggacccagtggaagccaaaccattcaaacccagaagtactacttcagacaaccacc
aggatggctgatatagacagaatcagcaccagtgctcatggagaaaactggaccccggaa
ccacagcctcctttcaataaccatgagtatcaggatgaagaggagaccccacatgctaca
agcacaactcctaatagtacagcagaagaagcagctacccagcaggagacgtggtttgag
aatggatggcaggggaagaacccccctaccccaagtgaagacttccatgtgacagaaggg
acaactgcctcggcccacaacaaccatccaagtcaaagaataacaacacagagtcaagag
gatgtttcctggacagatttcttggacccaatctcacatccaatgggacaaggtcatcaa
acagaaagcaaggatacagactccagtcatagtacaacccttcagcctactgcagctcca
aatacccatttggtggaagacttgaacaggacaggaccactttcagtgacaactccacag
agtcattctcagaacttctctacattacatggagagccggaagaagacgaaaaccatcca
acaacttctattctgccatctagcactaagagtggcgctaaagatgcaagaagaggtgga
agtcttcccacagatacaactacttctgtagaaggctacacctttcaatacccagacaca
atggaaaatgggactctcttcccagtgacccctgctaaaactgaggtctttggagaaact
gaagtgactcttgctactgactccaactttaatgttgatggctccttaccaggcgatcga
gactcatccatggactccagggggggttcccgctctgtgactcatggatccgaattagct
ggacactcaagtgggaaccaggacagtggagtgaccacaacttctggtcctatgaggaga
cctcagattccagaatggctcatcatcttggcatctctcctggcactggctctgattctt
gccgtctgcattgcggtcaatagtaggagaaggtgtgggcagaagaaaaagctggtgatc
aacggtggcaatggaacagtggaagacaggaaacccagtgagctcaacggggaggccagc
aagtctcaggaaatggtgcatttggtgaacaaggaaccatcagagaccccggaccagtgt
atgacagctgacgagacccggaatctgcagagtgtggacatgaagattggggtgtag

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