KEGG   Mus caroli (Ryukyu mouse): 110310626
Entry
110310626         CDS       T05910                                 

Gene name
Pdgfb
Definition
(RefSeq) platelet-derived growth factor subunit B
  KO
K17386  platelet-derived growth factor subunit B
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal01521  EGFR tyrosine kinase inhibitor resistance
mcal04010  MAPK signaling pathway
mcal04014  Ras signaling pathway
mcal04015  Rap1 signaling pathway
mcal04020  Calcium signaling pathway
mcal04072  Phospholipase D signaling pathway
mcal04151  PI3K-Akt signaling pathway
mcal04510  Focal adhesion
mcal04540  Gap junction
mcal04630  JAK-STAT signaling pathway
mcal04810  Regulation of actin cytoskeleton
mcal05167  Kaposi sarcoma-associated herpesvirus infection
mcal05200  Pathways in cancer
mcal05206  MicroRNAs in cancer
mcal05211  Renal cell carcinoma
mcal05214  Glioma
mcal05215  Prostate cancer
mcal05218  Melanoma
mcal05231  Choline metabolism in cancer
mcal05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    110310626 (Pdgfb)
   04014 Ras signaling pathway
    110310626 (Pdgfb)
   04015 Rap1 signaling pathway
    110310626 (Pdgfb)
   04630 JAK-STAT signaling pathway
    110310626 (Pdgfb)
   04020 Calcium signaling pathway
    110310626 (Pdgfb)
   04072 Phospholipase D signaling pathway
    110310626 (Pdgfb)
   04151 PI3K-Akt signaling pathway
    110310626 (Pdgfb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110310626 (Pdgfb)
   04540 Gap junction
    110310626 (Pdgfb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    110310626 (Pdgfb)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110310626 (Pdgfb)
   05206 MicroRNAs in cancer
    110310626 (Pdgfb)
   05231 Choline metabolism in cancer
    110310626 (Pdgfb)
  09162 Cancer: specific types
   05214 Glioma
    110310626 (Pdgfb)
   05218 Melanoma
    110310626 (Pdgfb)
   05211 Renal cell carcinoma
    110310626 (Pdgfb)
   05215 Prostate cancer
    110310626 (Pdgfb)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    110310626 (Pdgfb)
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    110310626 (Pdgfb)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    110310626 (Pdgfb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and growth factors [BR:mcal04052]
    110310626 (Pdgfb)
   00536 Glycosaminoglycan binding proteins [BR:mcal00536]
    110310626 (Pdgfb)
Cytokines and growth factors [BR:mcal04052]
 Growth factors
  Growth factors (RTK binding)
   110310626 (Pdgfb)
Glycosaminoglycan binding proteins [BR:mcal00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   110310626 (Pdgfb)
SSDB
Motif
Pfam: PDGF PDGF_N
Other DBs
NCBI-GeneID: 110310626
NCBI-ProteinID: XP_021039354
Ensembl: MGP_CAROLIEiJ_G0020031
UniProt: A0A6P5R3U3
LinkDB
Position
15
AA seq 242 aa
MNRCWALFLPLCCYLRLVSAEGDPIPEELYEMLSDHSIRSFDDLQRLLLHRDSVDEDGAE
LDLNMTRAHSGVELESSSRGRRSLGSLAAAEPAVIAECKTRTEVFQISRNLIDRTNANFL
VWPPCVEVQRCSGCCNNRNVQCRASQVQMRPVQVRKIEIVRKKPIFKKATVTLEDHLACK
CETVVTPRPVTRSPGTSREQRAKTPQARVTIRTVRIRRPPKGKHRKFKHTHDKAALKETL
GA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaatcgctgctgggcgctcttccttcctctctgctgctacctgcgtctggtcagcgct
gagggggatcccattcctgaggaactgtatgaaatgctgagcgaccactccatccgctcc
tttgatgatcttcagcgcctgctgctgcacagagactccgtagatgaagatggggctgag
ctggacttgaacatgacccgagcacactccggagtcgagttggaaagctcatctcgaggg
aggaggagcctagggtccctggcagcagcagagcctgccgtaattgccgagtgcaagacg
cgcacagaggtgttccagatctcgcggaacctcatcgatcgcaccaacgccaacttcctg
gtgtggccaccctgcgtggaggtgcagcgctgctccggctgctgcaataaccgcaatgtg
caatgccgggcctcgcaggtgcagatgcggccggtgcaggtgagaaagatcgagatcgtg
cgaaagaagcccatcttcaagaaggccacagtgaccttggaggaccacctcgcctgcaag
tgtgagacagtagtgacccctcggcctgtgactcgaagtcctgggacatccagggaacag
cgagccaagacgcctcaagctcgggtgaccattcggacggtgcgaatccgccggcccccc
aaaggcaagcaccgaaagtttaagcacacccatgacaaggcggccctgaaggagaccctc
ggagcctag

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