Mus caroli (Ryukyu mouse): 110311407
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Entry
110311407 CDS
T05910
Symbol
Boc
Name
(RefSeq) brother of CDO isoform X2
KO
K20020
brother of CDO
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04340
Hedgehog signaling pathway
mcal04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110311407 (Boc)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110311407 (Boc)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
ISET-FN3_linker
V-set
Pur_ac_phosph_N
Ig_4
C2-set_2
C1-set
Ig_5
Izumo-Ig
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
110311407
NCBI-ProteinID:
XP_021040355
Ensembl:
MGP_CAROLIEiJ_G0020768
UniProt:
A0A6P5R908
LinkDB
All DBs
Position
16:complement(41345200..41420817)
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AA seq
1108 aa
AA seq
DB search
MTTCQREQPILTLLWILLATAGCLADLHEVPQVTVQPMSTVQKLGGTVILGCVVEPPWVN
VTWRFNGKELNGSDDALGVFITRGTLVIAALNNHTVGRYQCVARMPAGAVASVPATVTLA
NLQDFKLDVQHVIEVDEGNTAVIACHLPESHPKAQVRYSVKQEWLEASRDNYLIMPSGNL
QIVNASQEDEGMYKCAAYNPVTQEVKTSGSGDRLRVRRSTAEAARIIYPLEAQTVIVTKG
QSLILECVASGIPPPRVTWAKDGSSIAAYNKTRFLLSNLLIDTTSEEDSGTYRCMASNGV
GDPGAAVILYNVQVFEPPEVTVELSQLVIPWGQSAKLICEVRGNPPPSVLWLRNAVPLTS
SQRLRLSRRALRVVSVGPEDEGVYQCMAENAVGSAHAVVQLRTARPDTTLRPGRDTKPIA
ATPPMPPSRPSRPDQMLREQPGLVKPPTSVQPTSLKCPGEEQVAPAEAPVILSSPRTSKT
DSYELVWRPRHEGSSRTPILYYVVKHRKVTNSSDDWTISGIPANQHRLTLTRLDPGSLYE
VEMAAYNCAGEGQTAMVTFRTGRRPKPEIVASKEQQIQRDDPGASLQSSSQPDHGRLSPP
EAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSV
EITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGYSGRVYERPVAGPYITFTDAVNE
TTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSY
DIKMQCFNEGGESEFSNVMICETKARKFSGQPGRPPPLTLAPPQPPPLETMERPVGTGAM
VARASDLPYLIVGVVLGSIVLIIVTFIPFCLWRAWSKQKHTTDLGFPRSALLASSCQYTM
VPLGGLPGHQANGQPYLGGVSGRACVSRVHGSRGCPAATVGCPGRKPQQHCPGELAQRED
TNSQLRQPIVSNGCDLQNQQVARGPQSASGEDAFLYTLPDDSTHQLLQPQDCCHLQKQPV
TTCQTAVRRTSESPGLESSWDPPYHSGPRCCLGLVPVEEVDSSDSCQVGGGDWCSQHPSG
TYTGQELGMRFPPSPSVHVSFETPPPTI
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtgccaaagagagcagcctatacttacactgctttggattctcttggccaca
gcaggctgccttgctgatttgcatgaggttcctcaggtcacggtccagcccatgtccact
gtccagaagctgggaggaactgtgatcctgggctgtgtggtggagccaccatgggtgaat
gtgacttggcgcttcaacgggaaggagctaaatggctctgatgatgctctgggtgtcttc
atcacccgtgggacccttgtcattgctgccctcaacaaccacactgtgggacggtaccag
tgtgtggcacggatgcctgcgggagctgtggccagtgtgccagccacggtgacgctagcc
aatctccaggacttcaaattagatgtgcagcatgtgatcgaagtagacgaggggaacaca
gccgtcattgcctgccacctgcctgagagccacccaaaagcccaggtccggtacagtgtc
aaacaggagtggctggaggcctctagagacaactacctgatcatgccatccgggaatctc
caaattgtcaatgccagccaggaggacgaaggcatgtacaagtgtgccgcctacaacccg
gtgacccaggaagtgaaaacctccggctccggagacaggctgcgcgtgcgccggtccacc
gctgaggctgcccgcatcatctacccactggaagcccagaccgtcattgtcaccaaaggc
cagagtctcatactggagtgtgtggccagtggaatcccaccacctcgagtcacatgggcc
aaggatgggtccagcattgctgcctataacaagactcgcttcctgctgagtaacttgctt
attgacaccaccagcgaggaggactcaggcacctaccgatgtatggccagcaatggggtt
ggggatcctggggcagcagtcattctctacaatgtccaggtgttcgaaccccctgaggtc
acggtggagctgtcccagctggtcatcccatggggccagagtgcaaagctcatctgtgag
gttcgaggaaaccccccaccctctgtactatggctgaggaatgcggtgcccctcacctcc
agccagcgcctccggctgtcacgtagagccctgcgggtggtcagtgttgggccggaggac
gaaggcgtgtaccagtgcatggctgagaatgcggttggcagtgcccacgctgtggtccaa
ctgaggaccgcccggccagacacaaccctgagacccgggagggataccaagccgattgct
gccacaccccccatgccaccctccagacccagcagacctgaccagatgcttcgggaacaa
ccggggcttgttaagcccccaacatcggtacagcctacttccctgaagtgcccgggagaa
gagcaggtagcccctgcagaggcacctgtcatcctcagctcaccccggacctccaagacg
gactcctatgagctggtgtggcggccccgccatgaggggagcagccggacacccatcctg
tactacgtagtgaagcatcgtaaggtcacgaactcctctgacgactggaccatttctggc
attccagccaaccagcaccgcctcaccctgaccaggcttgaccctggaagcttatacgaa
gtggagatggcagcctacaactgtgctggcgagggccagacagctatggtcaccttccga
acaggacggcggcccaaacctgagatcgtggccagtaaggagcagcagatccagagagat
gaccccggtgccagtctccagagcagcagccagcctgaccatggccgcctctccccccca
gaagctccagacagacccaccatctccacagcttctgagacctccgtgtacgtaacctgg
attccccgagggaacggcggcttcccgattcagtctttccgtgtagagtacaagaagcta
aaaaaagtgggagattggatactggctaccagtgccatacctccctcgaggctctctgtg
gaaatcacaggcctggagaaaggtatttcttacaagttccgagttcgtgctttgaacatg
ctaggggagagtgagcccagtgctccctcccggccctacgtggtgtcaggctacagtggc
cgtgtatatgagaggcccgtggcaggaccttacatcaccttcactgatgcagtcaatgag
accactattatgctcaagtggatgtatatcccagccagtaacaacaacaccccaatccat
ggcttctatatctactaccgacccacagacagtgacaatgacagtgattacaagaaggac
atggtggaaggggacagatactggcactccatcagccacctgcagccagagacttcctat
gatattaagatgcagtgcttcaatgaaggaggggagagcgagttcagcaatgtcatgatc
tgcgagaccaaagctcggaaattttctggtcagcctggaagacccccacccttgactcta
gctccaccacagcctccacccctagaaaccatggaacggccggtgggcactggagccatg
gtggcacgggccagcgacctgccctatctgattgtcggggtcgttctgggctctatagtc
ctcatcatcgtcaccttcattcccttctgcctatggagggcctggtctaagcagaaacat
acgacagatctgggttttcctcggagtgccctcctggcttcctcctgccagtacacaatg
gtgccattggggggacttccaggtcaccaagccaatgggcagccctacctcggtggcgtc
agtggacgggcctgtgtcagtcgagtgcatggaagcaggggctgccctgctgctacagtg
ggctgcccaggcaggaagcctcagcagcactgcccaggggagcttgcccagagggaagac
accaacagccaactgaggcagcccattgttagcaatggatgtgacctccagaaccagcag
gttgccagaggtccccagtctgcctcaggagaggatgctttcttatacacgctgcctgat
gactcaactcaccagctgctccaacctcaagactgctgtcacctccagaagcaacccgtc
accacatgccaaacggcagtgaggcgaacatctgaaagtcctggactagaatcttcatgg
gaccctccatatcattcagggccccggtgctgtttaggtcttgtaccagttgaagaagta
gacagttctgactcctgccaagtgggtggaggagactggtgttcccagcacccatcaggg
acctacacaggacaggaacttgggatgcggttcccgcctagcccatcagttcatgtgtcc
tttgaaacaccacctcccacaatttag
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