Mus caroli (Ryukyu mouse): 110311639
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Entry
110311639 CDS
T05910
Symbol
Tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03040
Spliceosome
mcal04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110311639 (Tra2b)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
110311639 (Tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcal01009
]
110311639 (Tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcal03041
]
110311639 (Tra2b)
Protein phosphatases and associated proteins [BR:
mcal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110311639 (Tra2b)
Spliceosome [BR:
mcal03041
]
Common components
Common spliceosomal components
SR proteins
110311639 (Tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
110311639
NCBI-ProteinID:
XP_021040732
Ensembl:
MGP_CAROLIEiJ_G0020602
UniProt:
A0A6P5RCZ5
LinkDB
All DBs
Position
16:complement(19475373..19495088)
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AA seq
288 aa
AA seq
DB search
MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS
RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL
GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN
GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY
RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacagcggcgagcagaactacggcgagcgggaatcccgttctgcttcccgaagt
ggaagtgctcacggatcggggaaatctgcacggcatacacctgcaaggtctcgctccaag
gaagactcaaggcgttctagatcaaagtcgaggtccaggtctgaatctaggtctagatcc
agaagaagttctagaaggcattatacaaggtcacgatcacgatctcgctcgcatagacga
tcccggagcaggtcttacagccgagattaccgcaggcgccacagccacagccattctccc
atgtctactcgaaggcgtcatgttgggaaccgggcaaatcctgaccccaactgttgtctt
ggtgtgtttgggttgagcttatacaccacagaaagagatctaagagaagtgttctctaaa
tatggccccattgctgatgtgtctattgtatatgaccagcaatctagacgttcaagagga
tttgcctttgtttattttgaaaatgtagatgatgccaaggaagctaaagaacgtgccaat
ggaatggagcttgatggacgccgaattagagtcgatttctctataacaaaaaggccccat
accccaacaccaggaatttatatggggagacccacttatggcagttcacgccgccgagac
tattatgacagaggatatgatcgggggtatgatgaccgggactattacagcagatcatac
agaggaggaggtggtggaggaggtggatggcgagcagctcaagacagggatcagatttac
agaagacggtcaccttctccttactacagtcgtggaggatacaggtcacgttctcgatca
cgatcctactcacctcgtcgctactaa
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integrated database retrieval system
