Mus caroli (Ryukyu mouse): 110312495
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Entry
110312495 CDS
T05910
Symbol
Runx2
Name
(RefSeq) runt-related transcription factor 2 isoform X2
KO
K09278
runt-related transcription factor 2
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04928
Parathyroid hormone synthesis, secretion and action
mcal05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
110312495 (Runx2)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110312495 (Runx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110312495 (Runx2)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
110312495 (Runx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TFIIA
BAF1_ABF1
DUF4770
Suf
DUF2828
Trp_oprn_chp
DUF702
eIF-3_zeta
Spt20_SEP
TgpA_N
TERB2
Plasmodium_Vir
Motif
Other DBs
NCBI-GeneID:
110312495
NCBI-ProteinID:
XP_021041793
Ensembl:
MGP_CAROLIEiJ_G0021639
UniProt:
A0A6P5R9T8
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All DBs
Position
17:complement(41318007..41527296)
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AA seq
594 aa
AA seq
DB search
MLHSPHKQPQNHKCGANFLQEDCKKALAFKWLISAGHYQPPRPTKSFKAASSIYNRGHKF
YLEKKGGTMASNSLFSAVTPCQQSFFWDPSTSRRFSPPSSSLQPGKMSDVSPVVAAQQQQ
QQQQQQQQQQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAAVPRLRPPHDNRTMVEIIA
DHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAE
LRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREP
RRHRQKLDDSKPSLFSDRLSDLGRIPHPSMRVGVPPQNPRPSLNSAPSPFNPQGQSQITD
PRQAQSSPPWSYDQSYPSYLSQMTSPSIHSTTPLSSTRGTGLPAITDVPRRISDDDTATS
DFCLWPSSLSKKSQAGASELGPFSDPRQFPGISSLTESRFSNPRMHYPATFTYTPPVTSG
MSLGMSATTHYHTYLPPPYPGSSQSQSGPFQTSSTPYLYYGTSSASYQFPMVPGGDRSPS
RMVPPCTTTSNGSTLLNPNLPNQNDGVDADGSHSSSPTVLNSSGRMDESVWRPY
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcttcattcgcctcacaaacaaccacagaaccacaagtgcggtgcaaactttctccag
gaagactgcaagaaggctctggcgtttaaatggttaatctctgcaggtcactaccagcca
ccgagaccaaccaagtcatttaaggctgcaagcagtatttacaacagagggcacaagttc
tatctggaaaaaaaaggagggactatggcgtcaaacagcctcttcagcgcagtgacaccg
tgtcagcaaagcttcttttgggatccgagcaccagccggcgcttcagccccccctccagc
agcctgcagcccggcaagatgagcgacgtgagcccggtggtggctgcgcagcagcagcaa
cagcagcagcagcagcaacagcagcagcaacaacagcaacagcaacaacagcagcagcag
cagcagcaggaggcggccgcagcagcagcggcggcagcggcggcggcagcagcggcggcg
gccgcagtgccccggttgaggccgccgcacgacaaccgcaccatggtggagatcatcgcg
gaccacccggccgaactggtccgcaccgacagtcccaacttcctgtgctccgtgctgccc
tcgcactggcggtgcaacaagaccctgcccgtggccttcaaggttgtagccctcggagag
gtaccagatgggactgtggttactgtcatggccgggaacgatgagaactactccgccgag
ctccgaaatgcctctgctgttatgaaaaaccaagtagccaggttcaacgatctgagattt
gtgggccggagcggacgaggcaagagtttcaccttgaccataacagtcttcacaaatcct
ccccaagtggccacttaccacagagctattaaagtgacagtggacggtccccgggaacca
agaaggcacagacagaagcttgatgactctaaacctagtttgttctctgatcgcctcagt
gatttagggcgcattcctcatcccagtatgagagtaggtgtcccgcctcagaacccacgg
ccctccctgaactctgcaccaagtccttttaatccacaaggacagagtcagattacagat
cccaggcaggcacaatcttccccaccgtggtcctatgaccagtcttacccctcctatctg
agccagatgacatccccatccatccactccaccacgccgctctcttccacacggggcacc
gggctacctgccatcaccgacgtgcccaggcgtatttcagatgatgacactgccacctct
gacttctgcctctggccttcctctctcagtaagaagagccaggcaggtgcttcagaactg
ggccctttttcagaccccaggcagttcccaggcatttcatccctcactgagagccgcttc
tccaacccacgaatgcactacccagccacctttacttataccccgccagtcacgtcaggc
atgtccctcggcatgtccgccaccactcactaccacacgtacctgccaccaccctacccc
ggctcttcccaaagccagagtggacccttccagaccagcagcactccatatctctactat
ggtacttcgtcagcatcctatcagttcccaatggtacccgggggagaccggtctccttcc
aggatggtcccgccatgcaccaccacctcgaatggcagcacgctattaaatccaaatttg
cctaaccagaatgatggtgttgacgctgacggaagccacagcagttccccaactgttttg
aattctagcggcagaatggatgagtctgtttggcggccatattga
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integrated database retrieval system
