KEGG   Mus caroli (Ryukyu mouse): 110312708
Entry
110312708         CDS       T05910                                 

Gene name
Msh2
Definition
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal01524  Platinum drug resistance
mcal03430  Mismatch repair
mcal05200  Pathways in cancer
mcal05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110312708 (Msh2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110312708 (Msh2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    110312708 (Msh2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    110312708 (Msh2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110312708 (Msh2)
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     110312708 (Msh2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_I MutS_IV AAA_27
Other DBs
NCBI-GeneID: 110312708
NCBI-ProteinID: XP_021042205
Ensembl: MGP_CAROLIEiJ_G0021949
UniProt: A0A6P5RDA6
LinkDB
Position
17
AA seq 936 aa
MAVQPKETLQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYMGPAGSKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENEWCLA
FKASPGNLSQFEDILFGNNDMSSSVGVMGIKMAVVDGQRQVGVGYVDSTQRKLGLCEFPE
NDQFSNLEALLIQIGPKECVLPGGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGEQINSAALPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYM
KLDTAAVRALNLFQGSVEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDRNRIEERL
DLVEAFVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQA
LEKYEGRHQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
HLDAVVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATRDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IACAKQKALELEEFQNIGTSLGCEEAEPAAKRRHLEREQGEKIILEFLTKVKQVPFTAMS
EESISAKLRQLRAEVVAKNNSFVNEIISRIKAAPAP
NT seq 2811 nt   +upstreamnt  +downstreamnt
atggcggtgcagcctaaggagacgctgcagttggaaggcgcggccgaggcgggcttcgtg
cgcttctttgagggcatgccggagaagccgagcaccacggtgcgcctcttcgaccgcggc
gacttttacacggcgcacggagaggacgcgctgctggcggcccgcgaggtgttcaagacc
cagggcgtgatcaagtacatggggccggcagggagtaagaccctgcagagtgttgtgctt
agcaagatgaactttgagtcttttgtgaaagatcttcttctggttcgtcagtaccgagtt
gaagtttataagaataaagctggaaataaggcgtcgaaggagaacgaatggtgtctggcg
tttaaggcttctcccggcaatctttctcagtttgaagacatcctgtttggtaacaatgac
atgtcatcttccgttggcgttatgggtattaaaatggctgtggttgatggtcaaagacag
gttggagttgggtatgtggattccacccagaggaagctgggcttgtgtgagttccctgag
aatgatcaattctccaatctcgaggctcttctgattcagattggaccaaaggaatgcgtt
ctacctggaggagagactactggagacatggggaaactgaggcaggttatccagagagga
gggattctgattacagaaagaaagagagccgacttctccactaaagacatttatcaggat
ctcaaccggttactgaaaggcaaaaaaggagaacagataaatagcgctgccttaccagag
atggagaatcaggttgcagtttcatcattatctgcagtaatcaagtttttagaactctta
tcagacgattcaaattttgggcagtttgaactggctacttttgacttcagccagtacatg
aagttggacacggcagcagttagagccctcaaccttttccagggttctgttgaagacacc
actggctctcagtctctggccgcattattgaataaatgcaaaactgctcaaggacaaaga
ttggttaaccagtggatcaagcagccgctcatggataggaacaggatagaggagaggtta
gatttagtggaagcttttgtcgaggattcggaactgaggcagagcttacaggaggatttg
cttcgccggttcccagaccttaaccggcttgccaagaagttccagagacaagcagcaaat
ttacaagactgttaccgactgtatcagggtattaaccagctccccagcgtcatccaggct
ctggagaaatacgaaggaagacaccaggcactgttgttggcagtttttgtgactcctctt
attgatcttcgttctgatttttcaaaatttcaagaaatgatagaaacgactttagatatg
gatcaggtggaaaatcacgagttcctcgtaaaaccttcatttgatcctaacctgagtgaa
ctaagagaagtcatggatggtctggagaagaagatgcagtccaccttaataagtgcagcc
cggggactcggactggatcctggcaaacagattaaattggactccagtgcacagtttgga
tattatttccgtgtgacctgcaaggaagagaaagtgcttcgtaacaacaagaacttcagc
acagtggacatccagaagaatggcgtgaagtttaccaacagtgaattgtcctctttaaat
gaagaatatactaagaacaaaggcgagtatgaagaggcccaggatgccattgttaaagaa
attgtcaatatttcctcaggctacgtagagccaatgcagacgctcaacgatgtgctggct
cacttagacgccgtcgttagcttcgcacatgtgtcaaacgcagcacctgttccttatgta
cgaccagtcatcttggagaaaggaaaaggaagaattatactgaaagcctccaggcatgct
tgtgttgaagttcaagatgaagttgcatttattccaaatgacgtgcactttgaaaaagat
aaacagatgttccacatcattactggtcccaatatgggaggtaaatcaacatacattcgt
cagaccggggtgattgtactcatggcccagatcgggtgttttgtgccctgtgagtcggca
gaagtgtccattgtggattgcatcttagctcgagtcggggctggtgacagtcaactgaaa
ggcgtctccacattcatggctgaaatgctggagactgcttccatcctcaggtcagcaacc
agagactccttaataatcattgatgagctgggaagaggaacctctacctatgatggattt
gggttggcatgggctatatcagattacatcgcaacgaagattggtgccttttgcatgttt
gccacccattttcatgaacttactgctttggccaaccaaataccaactgttaataatcta
catgtcacagcgctcactactgaggagaccctgactatgctttaccaagtgaaaaaaggt
gtctgtgatcagagtttcgggatccacgtggctgagctcgctaacttcccgaggcatgtg
atagcgtgcgccaagcagaaggctctggagcttgaggaatttcagaacattggaacctcg
ctgggatgtgaggaagccgagccggctgcaaagagacgccacctggaaagagagcaaggt
gagaaaattatcctggagttcctgaccaaggtcaagcaagtgccctttactgccatgtcg
gaagagagcatctcagcaaagctgaggcaactgagagccgaggtggtcgcaaagaacaac
agctttgtaaatgagatcatttcacggataaaggctgctccggctccgtga

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