Moraxella catarrhalis 25239: MC25239_01309
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Entry
MC25239_01309 CDS
T03381
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mcat
Moraxella catarrhalis 25239
Brite
KEGG Orthology (KO) [BR:
mcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcat03400
]
MC25239_01309 (sbcC)
DNA repair and recombination proteins [BR:
mcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MC25239_01309 (sbcC)
Archaeal homologous recombinant proteins
MC25239_01309 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_27
AAA_30
AAA_16
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AIT43715
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All DBs
Position
1423345..1427235
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AA seq
1296 aa
AA seq
DB search
MKILKLSFENINSLKGKWQIDFEDAAFYHHALFAITGPTGAGKTTILDAICLALYGETPR
LSISATQNELMSIGTAFAASSVIFRANDKIYQVSWSQRRAKQKTDGNLQAVSREISLLQH
ADDTHGKILEEKASLVNKEVERILGMNKVQFTRSVMLVQGEFAAFLQSDATERGQILEQI
TGTHIYAKIGQAAFEKHKEQLNLLKNLQIKLGEVNLLNTEEYDGLIKKISEITQQKNLLE
TQIKLMSDRQKIANEYQTLNQEMAHYQAKLIEHQEALTNFEPNIQRMKHAHDAKNLQPLY
TAFHEYHLEYNNKQDQLIILNHRLNEIQLSHQKRSQTHSEIKEKFNKITNDYENLKPTLQ
AVRRLDQHIASLRKEHQSMIQTLEKTKQDYTSTQNLLKETQSNQSNLVQDIDTIQQKIKG
IDSENLKKNLKLCDNHISQYDTLIQAITHAHQQQLWRINVFSNHLHELKDKREHFKSVNL
NLQSIDNQIGTINIKIIDNLNLTKKDDINVDILQKNIEDQYEKIKQQSHHLYTLERILKD
YEQYARIQSDISDTNRKIINLQEEKIKIQDILETVSQNIHQASQTHKAILENYELHKQIL
YMKMHFDQLQDGSPCPLCGSTEHPFKLQPHHLDDEHAKQAKEKLVFCENQLNELNHTATQ
HTTTLHKLQMALDDHQEHLNTAQNTSNSLYHDLNALWQTIASECSLEHANTLPSRNTIGK
FIKNSQDKIKNLEESYQLSSRLLHELNQLIAQKDRQMIEKENLKINGLKLRDDALVLMRE
IYDGKVHFCDQLLSAFYQLIQAQNTISLPNELNAIKQHLSKITTWYDNIAHHTQGDVLPE
AEAFNPSPLTLKEEEFGKVQYVLSQTKQMLENQANQATALNEDYINKQTKLIHLDAQINA
HTKKIQELTPVIAELEHTMANKVLEIKTQTNERITLLGDKNPDHTENNYQDKLTQIRQQL
ENATKNVHDDIADLHAQKATIESLNLTIKELANKLSQSKVSFEQALMASAFDTQAEFLAA
LILEDELIELKTAHDTLINQLSQTTISINNCQEKLDNLIKSNPNVHQFKLEDLHTELINL
QQQLESVNQSIGELNAIKNSELQNRQRHTQILKDIQRQEQENAIWAKLDMLIGSADGKKY
RNFVQGLTLDLVLHHANQILAKMNDRYLLTFDADSSRTLEILVTDLHQGDAVRSSKNLSG
GESFIISLALALGLSQINSQNIQIESLFLDEGFGTLDETALDLALNTLFELQQSGKSIGI
ISHVASLKERIDTQIIVEKHAGGYSTLHGAGVKNLS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttaaaactcagctttgaaaatatcaactccttaaaaggcaaatggcaaata
gattttgaagatgccgctttttatcaccatgctctatttgccatcacaggccccacaggt
gctggcaaaacaacgattttagatgctatttgtttggcgttgtatggtgagacgccccgt
ctgagtatttctgccacacaaaatgagctgatgagtattggtactgcttttgcagccagt
agcgtgatttttcgtgctaatgacaaaatttatcaggtcagttggtcacagcgtagagcc
aaacaaaaaaccgatggcaatttacaagccgtcagccgagaaatcagcttacttcagcat
gccgacgacacgcatggaaaaattcttgaagaaaaagcaagcttagttaataaggaagtt
gagcgtattttgggcatgaataaagtccaattcactcggtcggtcatgcttgtgcaaggt
gaatttgcagcgtttttacagtcagacgccactgagcgtggtcaaattcttgagcagatt
acaggcacacacatctatgccaaaattggtcaagcggcctttgaaaagcacaaagaacag
cttaatttattaaaaaatctacaaattaaattaggagaagtcaatttattaaatacagaa
gaatatgatggattaattaagaaaattagcgaaatcacgcaacaaaaaaacttgcttgaa
acacaaattaagctgatgagcgatcgccagaaaattgccaatgaataccaaactttaaat
caggaaatggctcattatcaagcaaaactgatcgagcatcaagaagccttaacaaacttt
gagccaaatatacagcgcatgaaacacgctcatgatgccaaaaatttgcagccgctttat
acagcatttcatgagtaccatcttgagtataacaataaacaagatcaattgattatacta
aatcatcgcttaaatgaaatccaattaagccatcaaaagcgtagccaaacacacagtgag
attaaagaaaaatttaacaaaataactaatgattatgaaaatttaaagccaactttgcaa
gcggttcgcaggcttgaccaacatattgcctctttgcgtaaagagcatcaaagcatgatc
caaacccttgaaaaaacaaagcaggactatacatctacacaaaatttactcaaagaaact
cagtcaaatcagtcaaatttggtacaagatattgacaccattcaacaaaaaattaaaggc
attgacagtgaaaatttaaagaaaaacttaaaattatgcgataatcatatctcacaatac
gatacactcattcaagcaataacacacgcccatcaacagcagctttggcgtatcaatgta
tttagcaatcatcttcatgaactcaaagataagcgagagcattttaagtctgttaatcta
aatctacagtctatagataatcaaattggcactataaatataaaaattattgataattta
aacttaacaaaaaaagatgatattaatgtagatattttacaaaaaaatatagaagatcag
tacgaaaaaatcaagcagcaatcacatcatttatatacgctagagcgaatcttgaaagat
tatgagcaatatgcacgcattcaatctgacatcagcgatacaaaccgtaagattatcaac
ctacaagaagaaaaaatcaaaattcaggatatcttagagacagtttctcaaaatatccat
caagcaagccaaacccacaaagccatcttggaaaattatgagctacacaagcaaatttta
tacatgaaaatgcactttgaccaactgcaagatggtagtccttgtccactttgtggcagt
accgagcatccttttaaattacagccccatcatttggacgatgaacatgccaaacaagcc
aaagaaaaattagtattctgcgaaaatcagcttaacgaactcaatcacaccgctactcag
cacacgaccacattacacaaactgcagatggctttggatgatcatcaagagcatctaaat
actgcacaaaatacaagtaactctctttatcatgatcttaatgccctatggcaaacgatc
gccagtgaatgcagcctagaacatgcaaatactctaccaagccgaaatactattggaaaa
tttattaaaaacagtcaagataaaattaaaaatctagaagagtcttatcagctgagcagt
cggctattgcatgaacttaatcagctgattgctcaaaaagatagacaaatgatcgaaaaa
gaaaacttgaaaatcaatggtctaaagcttcgtgatgatgctttggtgctgatgcgtgag
atatatgatggtaaagtacatttttgcgatcaactattatctgcattttatcagctcatc
caagcacaaaataccatcagcctgccaaatgagcttaacgccattaaacagcatttgtct
aaaatcaccacttggtacgataatatcgcacatcacacccaaggcgatgttctaccagaa
gctgaagcattcaaccctagcccgttaacgctcaaggaagaagagtttggcaaagttcag
tatgtgttatcacaaaccaagcaaatgcttgaaaatcaagccaatcaagccaccgcactc
aatgaagattatatcaataagcaaaccaagctgattcacctagacgctcaaatcaacgca
cataccaaaaaaatccaagaactcacacctgttattgctgagcttgagcatacgatggct
aataaagtgcttgaaattaaaacacaaaccaacgaacgcatcactttattaggtgataaa
aatcctgatcatactgaaaacaattatcaagataagctaacacagataagacagcagtta
gaaaatgccactaaaaatgtacatgatgatattgccgacttacatgcccaaaaagcaacc
attgagagcctaaatctaaccataaaagaactggccaataaactcagccaaagcaaggta
agctttgagcaagcactgatggcatcagcgtttgatactcaagcggagtttttggcggca
ttaatcttagaagatgagttaatcgagctaaaaaccgctcatgatactctcattaatcaa
ctaagccaaacgacaatatcaatcaataactgtcaagaaaaacttgataatttaatcaaa
tcaaatcccaatgttcatcaattcaagcttgaagatttacacacagagctcatcaatctg
caacaacagctagagagtgtcaaccaatctattggcgaacttaacgccatcaaaaatagt
gagcttcaaaaccgtcagcggcatacacagattcttaaagacatccaacgccaagaacaa
gaaaatgcaatttgggcaaaacttgatatgctgattggctcagcagatggtaaaaaatac
cgaaactttgtgcagggtttaacactggatttggtgctacatcatgccaatcaaatttta
gcaaaaatgaacgatcgctacttgttgacctttgatgcagacagctcaaggacacttgaa
atcttagtgacagatcttcaccaaggcgatgcggtacgcagcagtaaaaatttatcaggt
ggtgaaagttttatcatctcactggctttagcgctcggtttgtcgcagatcaatagccaa
aatatacaaattgaatcactatttttggatgaaggctttggtacactggatgaaaccgct
ttagatttggcacttaataccttatttgaactacagcaaagcggtaaaagcattggtatt
attagccatgtcgccagcctaaaagaacgcattgatacccaaattatcgttgaaaaacat
gcaggcggatatagcaccttacatggtgctggtgtcaaaaacctttcttaa
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