KEGG   Mycolicibacterium chubuense: Mycch_1764Help
Entry
Mycch_1764        CDS       T02150                                 

Definition
(GenBank) ATP-dependent DNA ligase I
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mcb  Mycolicibacterium chubuense
Pathway
mcb03030  DNA replication
mcb03410  Base excision repair
mcb03420  Nucleotide excision repair
mcb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mcb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mycch_1764
   03410 Base excision repair
    Mycch_1764
   03420 Nucleotide excision repair
    Mycch_1764
   03430 Mismatch repair
    Mycch_1764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcb03032]
    Mycch_1764
   03400 DNA repair and recombination proteins [BR:mcb03400]
    Mycch_1764
Enzymes [BR:mcb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mycch_1764
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mycch_1764
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mycch_1764
DNA replication proteins [BR:mcb03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Mycch_1764
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Mycch_1764
DNA repair and recombination proteins [BR:mcb03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mycch_1764
   NER (nucleotide excision repair)
    Other NER factors
     Mycch_1764
   MMR (mismatch exicision repair)
    Other MMR factors
     Mycch_1764
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-ProteinID: AFM16555
UniProt: I4BGZ8
LinkDB All DBs
Position
complement(1831386..1832930)
Genome map
AA seq 514 aa AA seqDB search
MLLVEVAQASADVAAASARLAKIARIADLLRSAAAAGDPRLVAVVVSWLSGELTQRQIGV
GWASLRALPEPAAEPTLTVLGVDGALGDIGTTSGKGSQARRARLVAELFSAATAIEQTFL
RRLLTGELRQGALVGVMADAVSKAAGIDPAAARRAAMLSGDLPTVAAAAVTGGVAALEAF
TLQVGRPVGPMLAQTATSVADALERLDGRAVFEAKLDGARVQIHRRGDSVSVFTRSLDDV
TARLPEVVDAALALPVTDLIADAEAIALRPDGRPQRFQVTASRFGRRGGTAGPDTQKLSV
FFFDLLHVDGVDVLDQPAHERVARLDAIVPDRQRVDRLLTTDPAEAQTFLDTTLAAGHEG
VMAKSPTAPYEAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRTGKLSNIHLGARDPQTGG
FVMLGKTFKGMTDEMLAWQTERFLELADGLTSGYSVRVRPEQVVEIAFDGLQTSSRYPGG
MALRFARVLRYRDDKSAAEADTIDTVRALYERSD
NT seq 1545 nt NT seq  +upstreamnt  +downstreamnt
gtgctcctcgtagaagtcgcgcaggcgtccgcggatgtcgctgccgcctcagcgcggctg
gccaagatcgctcgcatcgccgatctgctgcgttcggccgcggccgcaggcgacccgcgc
ctggtcgcggtcgtggtgtcgtggttgtcgggtgagctcacccagcgccagatcggcgtc
ggctgggcgagcctgcgggcactgccggagccggccgccgaaccgaccctgacggtgctc
ggcgtcgacggcgcgctgggcgacatcgggacgacatcgggcaaggggtcgcaggcccgc
cgggctcggctggtcgccgagttgttctcggcggccacggccatcgagcagacgttcctg
cgccgcctgctcaccggcgagttgcggcagggcgccctggtcggcgtgatggccgacgcg
gtcagcaaggccgccggcatcgatcccgcggccgcgcgccgcgccgcgatgctcagcggg
gacctgccgacggtcgcggcggcggcggtcaccggcggtgtcgccgcgctcgaggcattc
accctgcaggtcggcaggccggtcgggcccatgctggcgcagacggcgaccagcgtcgcc
gatgcgctcgaacgcctcgacggcagagccgttttcgaggcgaagctggatggcgcacgc
gtccagatccaccgccggggcgactcggtgtcggtgttcacccgcagtctcgacgacgtc
accgcgcgcctgcccgaggtcgtcgatgcggcgctggccctgcccgtcaccgatctgatc
gccgacgccgaggccatcgcgctgagacccgacggccgtccgcagaggtttcaggtcacc
gcctcgcggttcgggcgccgcggcggtacggcgggccccgacacccagaagctctccgtg
ttcttcttcgatctgctgcacgtcgacggtgtcgacgtcctcgaccagcccgcgcacgag
cgggtcgcccggctcgacgcgatcgtgcccgaccggcaacgcgtcgaccgcctgctgacc
accgatcccgccgaagcccagacgtttctggacaccacgctggcggcgggccacgaaggg
gtgatggcgaagtcgccgaccgcgccctatgaggccgggcggcgcggcgcggggtggttg
aaagtcaaaccggtgcacacgctcgacctcgtcgtcctggccgtcgagtggggatcgggc
cggcgcaccggcaagctctcgaacatccacctgggcgcgcgggacccgcagaccggagga
ttcgtgatgctcggcaagaccttcaagggcatgaccgacgagatgctggcgtggcagacg
gagcgcttcctcgagctggccgacggcctgacatccgggtactcggtcagggtgcggccc
gagcaggtcgtcgagatcgcgttcgacgggctgcagacgtcgtcgcggtatccgggtggc
atggcactgcgattcgcccgggtcctgcgctaccgcgacgacaagagcgcggccgaggcc
gacaccatcgacaccgtgcgcgcgctctacgagcggtccgactga

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