Mycolicibacterium chubuense: Mycch_2001
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Entry
Mycch_2001 CDS
T02150
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mcb
Mycolicibacterium chubuense
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcb03400
]
Mycch_2001
Enzymes [BR:
mcb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Mycch_2001
DNA repair and recombination proteins [BR:
mcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Mycch_2001
Prokaryotic type
Mycch_2001
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFM16786
UniProt:
I4BHM9
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All DBs
Position
complement(2076071..2077411)
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AA seq
446 aa
AA seq
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MPAVLWFRRDLRLCDHPALLAAADVDGAGTDVLACYVLDPRLEASAGPRRLQYLYDALRD
LDSALGGRLLVTRGEPKRRIPAVAKAVGASSVHVSGDFTPFGRRRDDQVRDALGDVELVA
TGSPYLVSPGRVTKGDGTPYKVFTPFFDAWRRHGWRPPADSKKSSARWIDPADVGRGGLA
EIPDAGVELDLPAGEQAARHQWEQFLGDGLAGYADDRNRPDLAATSRMSAHLKFGAIHPR
TMAADLGRGKGAQAYLRELAFRDFYASVLHEWPHSVWWNWNKNFDGIEVDEGHDAKKAFE
AWKAGKTGFPIVDAGMRQLAATGFMHNRVRMIVASFLVKDLHLPWQWGARWFLEQLVDGD
MANNQHGWQWAAGCGTDAAPYFRVFNPTTQGAKFDPSGEYVRRWVPELADVSDVHKLDGD
RPDGYPEPIVDHKRERAEALRRYSAI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgtgttgtggttccgtcgcgatctgcggctctgtgatcatcccgcgttgctg
gccgccgccgacgtcgacggcgccggcaccgacgtactggcctgctacgtgctcgacccg
cgcctcgaggcgtcggccggaccgcggcggctgcagtatctctacgacgcgctgcgcgac
ctggactccgccctcggcggccggctcctggtcacccgcggcgagcccaaacgccggatc
ccggccgtggccaaggcggtcggcgcgtcctcggtgcacgtgtccggcgacttcaccccg
ttcggtcggcggcgtgacgatcaggtgcgcgacgccctcggcgacgtcgaactggtggcg
accgggtcgccgtatctggtgtcacccggtcgcgtcaccaagggcgacggcaccccgtac
aaggtgttcaccccgttcttcgacgcgtggcgcagacacgggtggcgtccgccggccgac
tcgaagaagagttcggcccgctggatcgacccggcagacgtcggccgcggaggcctcgcc
gaaatcccggacgccggtgtggaactcgatcttcccgccggcgagcaggccgcccggcac
cagtgggagcagttcctcggcgacggtctggccggttacgccgacgaccgcaaccgcccc
gacctcgccgcgaccagtcgcatgtcggcgcatctgaagttcggcgcgatccatccccgg
acgatggccgccgatctcggacgcggcaaaggcgcccaggcgtatctgcgggagctggcg
ttccgggatttctacgcctcggtgctgcacgagtggccgcacagcgtgtggtggaactgg
aacaagaacttcgacggaatcgaggtcgacgagggccacgacgcgaagaaggcgttcgag
gcgtggaaggccggcaagaccgggttcccgatcgtcgacgccgggatgcgccagctggcg
gccaccggcttcatgcacaacagggtgcggatgatcgtggcctcgtttctggtcaaggat
ctgcatctgccgtggcagtggggtgcgcgctggttcctcgagcaactggtggacggcgac
atggccaacaaccagcacggctggcagtgggccgccggctgtggcaccgacgccgccccg
tatttccgcgtgttcaatccgaccacccagggcgcgaagttcgacccctcgggtgagtac
gtgcgccgctgggtccctgaactggccgacgtctccgacgtccacaagctcgacggcgac
cgccccgacggctaccccgaacccatcgtcgaccacaagcgcgagcgcgccgaagcactg
cgccgctacagcgctatctga
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