Mycolicibacterium chubuense: Mycch_4852
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Entry
Mycch_4852 CDS
T02150
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mcb
Mycolicibacterium chubuense
Pathway
mcb03030
DNA replication
mcb03430
Mismatch repair
mcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mycch_4852
03430 Mismatch repair
Mycch_4852
03440 Homologous recombination
Mycch_4852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcb03032
]
Mycch_4852
03400 DNA repair and recombination proteins [BR:
mcb03400
]
Mycch_4852
Enzymes [BR:
mcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mycch_4852
DNA replication proteins [BR:
mcb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mycch_4852
DNA repair and recombination proteins [BR:
mcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mycch_4852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AFM19547
UniProt:
I4BQJ0
LinkDB
All DBs
Position
complement(5095342..5096340)
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AA seq
332 aa
AA seq
DB search
MSSTAGHRWGRPADAPGSGWAVVDVETSGFRPGQARIVSIAALALSDDGNVEKSFYSLLD
PGVDPGPTHVHGLTAEMLAGQPTFADVAGDLVEVLRGRTLVAHNVGFDYSFLAAEAEMVS
AELPVETVMCTVELGRRLDLGLENLKLETLAAHWGVTQMRPHDALDDAMVLAQILKPVLV
RAREHRKWLPVHPVSRRTWPNGRVTHDELRPLKAVAARTPCPYANPGRFVAGRPLVQGMR
VALAAEVGHTHEELIERILHAGLAYTEAVDAHTSLVVCDDVPDQGKGYQAGELGVPLLSA
PEFLRGLESVVGGADIEEFTDTSAADDQFTLF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcaaccgccggacatcgctggggcaggcccgccgatgcacccggttcgggatgg
gcagtggtcgacgtggagacctcgggtttccggcccggtcaggcccgcatcgtgagcatc
gcggcgctggccctcagcgacgacggcaacgtcgagaagagtttctacagcctgctcgac
ccgggcgtcgaccccggtccgacgcacgtgcacgggctgacggcggagatgctggccggc
cagcccaccttcgcggacgtcgccggcgatctggtcgaggtgctgcgcgggcgcacgctg
gtcgcgcacaacgtcggcttcgactactcgttcctggcggccgaggccgagatggtgtcc
gccgaactgcccgtggagacagtcatgtgcacggtggaactgggccgccggctcgatctc
ggcctggagaacctcaagctcgagacgctggccgcgcactggggtgtcacccagatgcgg
ccccacgatgcgctcgacgatgcgatggtgctggcacagatcctcaaaccggtgctggtg
cgcgcccgggagcaccgcaagtggctgccggtccaccccgtgtcgcgccggacatggccc
aacggccgggtcacgcacgacgagctgcggcccctcaaagcggtcgcggcgcgaacaccc
tgcccctacgccaaccccggacggttcgtcgcgggccggccgctggttcaggggatgcgg
gtcgcgctggccgccgaggtcggccacacccacgaggagctcatcgagcgcatcctgcac
gccggcctggcgtacaccgaagccgtggacgcccatacgtcactggtcgtctgcgacgac
gttccggaccagggaaagggctatcaggcaggcgaactcggcgtgcccctgctgagcgcc
ccggagttcctgcgcggtctggagtcggtggtcggcggcgcagacatcgaggagttcacc
gatacctccgccgccgacgaccagttcacgttgttctga
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