Macaca fascicularis (crab-eating macaque): 102140466
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Entry
102140466 CDS
T02918
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
mcf
Macaca fascicularis (crab-eating macaque)
Pathway
mcf04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mcf00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102140466 (COL8A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
102140466
NCBI-ProteinID:
XP_005548366
Ensembl:
ENSMFAG00000037489
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Position
2:19654547..19804808
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AA seq
747 aa
AA seq
DB search
MVMAVLPGPLQLLGVLLTISLSSIRLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQV
PHMPLAKDGLAMGKEMPHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKKGKVEIPLASLR
GEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGA
KGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLR
GPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGP
QGPIGVPGVQGPPGIPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPG
PKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGLKGEGG
IVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGLKGVPGLPGVPG
LLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGVGKPGV
AGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPALMPPTPPPQGEYLPDMGLGIDGVKP
PHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEV
PGVYYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQ
MPSEQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggctgtgctgcctggccctctgcagctgctgggagtgctgcttaccatttcc
ctgagctccatcaggctcattcaggctggtgcctactatgggatcaagccgctgccacct
caaattcctcctcagatgccaccacaaattccacaataccagcccctgggtcaacaagta
cctcacatgcctttggccaaagatggccttgccatgggcaaggagatgccccacttgcag
tatggcaaagagtatccgcacctaccccaatatatgaaggagattcaaccggcgccaaga
atgggcaaggaagcagtacccaagaaaggcaaagtagaaataccattagccagtttacga
ggggaacaaggtccccgtggagagcctggcccaagaggaccacctgggccccctggtttg
ccaggtcatgggatacctggaattaaaggaaaaccagggccacagggatatccaggagtt
ggaaagccaggtatgcctggaatgccagggaagccaggagccatgggcatgcctggggca
aaaggagaaattggacagaaaggggaaattgggcctatggggatcccaggaccacaagga
cctccagggcctcacggacttcctggcattgggaagccaggtgggccagggttaccaggg
caaccaggaccaaagggtgatcgaggacccaaaggactaccaggacctcaaggccttcgg
ggtcctaaaggagacaagggcttcgggatgccaggtgcaccaggtgtaaagggccctcca
gggatgcatggccctcccggccctgttggactgccaggagtgggcaaaccaggagtgaca
ggcttccctggaccccagggccccctgggaaagccaggggctccaggagaacctgggcca
caaggccctattggggtaccaggggttcaaggacctcctgggatacctggagttggaaag
ccaggccaggatgggatcccgggccagccaggatttccaggtggcaaaggggagcaagga
ctgccagggttaccaggacctccaggccttccagggattgggaaaccaggcttcccagga
cccaaaggtgaccggggcatgggaggtgttcctggggctcttggaccaagaggggagaaa
ggaccaataggtgccccaggaatagggggtcctccaggcgagccaggcctgcctggaatc
ccaggtcctatgggccctccaggtgctattggttttcctggactcaaaggagaaggtggg
attgtagggccacaggggccaccaggtcccaagggtgagccagggcttcaaggcttccca
ggaaagccaggtttccttggcgaagtagggcctcctggcatgaggggtttgccaggtccc
atagggcccaagggggaagctgggctcaaaggtgtgccaggactccctggtgttccaggg
cttctcggacctaagggagagccaggaatcccaggggatcagggtttacagggcccccca
ggtatcccagggattgggggccctagtggccccattggaccacctgggattccaggcccc
aaaggggagcctggcctcccagggccccctgggttccctggtgtagggaaacccggagtg
gcaggacttcatggccccccagggaagcctggtgctcttggtcctcaaggccagcctggc
cttccaggacccccaggccctccaggacccccaggacccccagccttgatgccccctaca
ccaccaccccagggagagtatctgccagatatggggctgggaattgatggcgtgaaaccc
ccccatgcctacggggctaagaaaggcaagaacggagggccagcctacgagatgcctgca
tttaccgccgagctaaccgcacctttcccaccggtgggggccccagtgaagtttgacaaa
ctgctctataacggcagacagaactacaacccgcagacgggcatcttcacctgtgaggtc
cctggtgtctactactttgcataccacgttcactgcaaggggggcaacgtgtgggttgct
ctattcaagaacaacgagcccgtgatgtacacgtatgacgagtacaaaaagggcttcctg
gaccaggcgtctgggagtgcagtgctgctgctcaggcccggagaccgggtgttcctccag
atgccctcagaacaggctgcaggactgtatgccgggcagtatgtccactcctccttttca
ggatatttattgtatcccatgtaa
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