Momordica charantia (bitter melon): 111004983
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Entry
111004983 CDS
T05045
Name
(RefSeq) endoribonuclease Dicer homolog 3a isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcha03036
]
111004983
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111004983
microRNA pathway
RISC loading complex
111004983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
PAZ
ResIII
Helicase_C
DND1_DSRM
SNF2-rel_dom
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
111004983
NCBI-ProteinID:
XP_022132010
UniProt:
A0A6J1BR97
LinkDB
All DBs
Position
Unknown
AA seq
1661 aa
AA seq
DB search
MHDLEEQNRNGARKRNFSDMEPSFASDFSDFKQPMDKGFIPRRYQTEVFEVGMRRNTIAV
LETGAGKTMIAVMLIKEIGLTMKSSGSKKYIIFLAPTVHLVHQQFNVIKAHTDFEVAEYY
GAMGVDDWSLKCWEKETSEHDVLVMTPQILLDALRKAFLSLGTVCLMIIDECHRATGNHP
YTKIMKDFYHKSDNKPKIFGMTASPVIRKGVSSSSDCECQIADLESIMDSQIYAIEDKKE
VEIYVPSAKEICIFYEPAKSPSMELKSKIEALWFKFDALLSNSQGAVQVHYKDVDSKLKP
LKKRLSSDHLKISYCLDELGLICAYEAIKVLLENVNITNEEYEVFRESSLQYKCFLEEAL
LVIGESFPLGNENVLNFGLDIWKAVDLGYISSKLFELLQLFESFGVSRQVLCLIFVERII
VAKVIERFVKKVPKLSHFTVSYVTGCNSSVGALAPKVQKETLESFCHGKLNLLFSTDVVE
EGLHVPNCSSVVRFDLPKTIRSYVQSRGRARQNNSQYILLLERGNLKQRDQLFDVMRSER
SMTDAAMSRDPDACILKPFSIVETDCYIVETTGASVTADSSVGLIYQYCKKLPGDKYFSP
KPIFQLSYGEGSYECRLTLPPTAAFQSIVGPSSRNSNLSKQLVCLEACKKLHQLGALNDH
LLPLIEEISEFDTALKSNVSTSRAGTTKRKELHGRTAIGALSGTWGELVEGASFQAYKFD
FSCSVVYEIYSGFVLLIESKLDDDVGNIELELYLRSKTVKASVSFGGQVHLDAEQIRKAK
CFQELFFNGMFGRLFIGSKLTGGKREFLLQKDTKPLWVTSNMYLLLPVDLTDASSHDLWK
IHWRAVDSCVSVVEFLKKNSSLDTESNCGALPSRNNSAETGSKAASLIHFANCVLDVHSL
KDLVVLAIHTGKMYSIVEVVSNTSAESTFDGNSDRAQSDYINFADYFKKKYGITLRYPQQ
PMLRLKQSHNPHNLLVNFNDEGETSDKLQSGHASKKPQMHVHMPPELVVSMDVPKGVWKS
TYLLPSLMHRLESLMLASQLRKEINYHSNSLCISSSLIVEALTTLGCCESFSLERLELLG
DSVLKYAVSCHLFLKFPEKHEGQLSSQRQQVICNATLHRLGIKCKLQGYIRDSAFDPRRW
VAPGQRTTRPVPCKCGVDTVEVPLDDKFCTEDPKVVLGKCCDKGHRWVVSKTIADCVEAL
IGAYYVNAGIDAALHVIKWLGIDADLGVSLVVDAITSASLRSCILKETEIETLESKIGYE
FAVKGLLLEAITHTSDQELGVNYCYQRLEFLGDSVLDLLITWHYYQTHSDIDPGELTDLR
SASVNNENFAQVAVRRNLQQHLQHCCGLLIGQITEYVKYLSESLDAGKSLHGNKGPKVLG
DMVESIAGAILIDTELNLDEVWRIYKPLLTPFVTPDKLELQPLRELIELCDSLGYFIKDK
CTRKGEIIHAELRLQLQDVLLIGEGYERTRKAARGEAAHRLLVQLETRGIYYSRSGSKKR
KQNPNHVESALVLPSSINCSTEACDPNLETPDSVMVHSSATNCSTEGYSPGMDIPVIGPV
SLKKGGPRMTLFELCKKLQWPMPTFNTVENKSRVPMEFGEGSERRTGFNSFWSNIILQIP
NAGSIECEGDARADKKSSLDSASLVMLKELQRQGRVNINDS
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacctcgaggagcaaaatcgcaatggtgcacgcaagcgaaacttcagtgacatg
gagcccagttttgcttctgatttttccgatttcaaacaacccatggacaagggcttcatt
cctagaaggtaccaaacggaggtttttgaagttgggatgaggagaaacaccatagcggtg
ttggaaacaggtgctggaaagaccatgatcgcagtgatgcttatcaaagaaattggacta
actatgaagtccagtggtagtaagaagtacatcattttcttggcgcccaccgttcatctg
gttcatcagcaatttaacgttattaaagctcatactgattttgaagtggcggagtattat
ggtgccatgggggtcgatgattggagtttgaaatgctgggagaaggaaacaagtgaacac
gatgtacttgttatgacccctcaaattcttctcgatgcactgagaaaggcatttttgagt
ctgggaacagtatgcttgatgatcattgatgaatgccatcgtgctactggtaatcaccct
tatacaaaaatcatgaaggatttttatcacaaatctgacaacaaaccaaagatttttgga
atgactgcctcacctgttattagaaaaggggtttcctcttcctccgattgtgaatgccaa
atagcagaccttgaaagtatcatggattcccagatttatgctattgaggacaagaaagaa
gttgaaatatatgttccctctgcaaaagaaatatgtatattttacgaaccagcaaagtct
ccaagtatggagttgaagtcaaagatagaagccctgtggttcaagttcgatgctttgttg
tcaaactcacaaggggcagtgcaagttcattataaagacgtggacagcaagcttaagcca
ctgaaaaaacgactgtccagtgatcatttaaagatctcttattgcctcgacgaacttggc
cttatatgtgcttatgaggccattaaagttttattagagaacgtcaatattacaaacgag
gaatatgaggtttttagagaaagttctttgcagtataaatgtttccttgaggaagcatta
ctagtaattggggaatcattcccacttggaaatgaaaatgttctgaattttggtcttgac
atttggaaagcggtagatttgggctacatttcttctaagttatttgaacttctccaactt
tttgaatcatttggagtatctaggcaggtgttgtgtctcatatttgttgaaagaataatt
gtagcaaaagttattgaaagatttgtgaaaaaagtacccaaattatctcattttacggtt
tcatatgtgactggatgtaattcatcagttggtgcactggcaccaaaagttcagaaggag
acattggagtcattttgccatggcaagctcaatcttttattttccactgatgtagttgag
gagggacttcatgtaccaaattgctcatctgtggtacggtttgacctacctaagaccatt
cgtagttatgtacagtctcgaggacgtgctcgacagaacaactcccaatatattttgttg
ctggagagaggaaatctgaaacaaagagatcagctatttgatgtcatgagaagtgagcga
tcaatgacagatgcagctatgagtagagaccctgatgcatgcattttgaaacctttttca
attgtggagacagattgttacattgtggagacaactggggcatcggttactgcagattct
agtgttggtctcatatatcaatactgcaaaaagctccctggtgataaatatttcagtccc
aaaccaatctttcaactctcatatggtgaaggatcatacgagtgtcggctaactttacct
cctacagcagcttttcaaagtatagttggtccttcaagtaggaattctaatttgtctaag
cagcttgtatgcttggaggcatgtaagaagctgcatcaattaggtgcacttaatgaccat
cttcttcccttgattgaagagatatcagaatttgacacagctctgaaaagcaacgtatcc
acttctagagcaggaacaacgaaaagaaaggaactgcatggcagaacggccattggagct
ttatctggaacatggggagaactagttgaaggggcctcttttcaggcttataaatttgac
ttctcctgtagtgttgtgtatgagatttattctggatttgttcttctgatagaatcaaaa
ctagatgatgatgtgggaaatattgaacttgaactttatttacgatcaaagacagttaag
gcttctgtgtcttttggtgggcaagttcatttggatgccgagcagataaggaaagcaaag
tgctttcaggagctttttttcaatggaatgtttgggagattgtttattgggtcaaaatta
accggaggcaagagggaatttttacttcagaaagacacgaagcctctttgggttacatca
aacatgtatttgcttctaccagtggatttgacggatgcttcaagtcatgatttatggaaa
attcattggagagcagttgattcttgtgtctctgtggttgagtttttgaagaaaaactca
tctttggatactgaaagtaattgtggtgccttaccttctaggaacaactctgctgagaca
gggagcaaagctgcaagtttaattcacttcgcaaattgtgtgctagatgttcattcctta
aaggacttggtggtattggctattcatactggaaagatgtactcaatcgttgaagttgtg
agtaacacatctgctgagagcacttttgatgggaacagtgacagagcccaatctgattac
attaactttgctgactacttcaaaaaaaagtacgggattacactaagatatccacaacag
cctatgttgcgtttaaagcaaagtcataatcctcacaatctacttgtcaactttaacgat
gaaggtgagactagtgataagttgcaatctggccatgcttccaaaaagccccaaatgcat
gtccatatgcctcctgaacttgtggttagcatggatgttccaaagggggtttggaagtca
acatacttactaccatctttgatgcaccgtttggaatctttaatgttagctagccagctt
aggaaggagattaattatcattcgaatagcctctgtatatcaagctcattgattgtggaa
gctcttacaacccttggatgttgcgagagtttttccttagagcggttggaattgcttggt
gattcagttttgaagtatgctgtgagctgccacctctttctcaagtttcctgaaaaacat
gaaggacagttatcttctcagcgccaacaggttatctgtaatgcaaccttacataggctg
ggaataaagtgcaagttacagggatacattcgtgattctgcatttgatccacgtcggtgg
gtggcaccaggacaacgtactactcgccctgttccttgtaaatgtggagtggatacagta
gaagttcctttggatgacaaattctgcactgaagatccaaaagtcgttttgggtaaatgc
tgtgataaaggacacaggtgggtggtttcaaaaactatagccgactgtgttgaagccctt
ataggggcctattatgttaatgctggaattgatgctgcactccatgtgattaagtggctc
ggaattgatgctgatcttggtgtatcattagttgttgatgcaattacttctgcatctctg
agatcctgcatcttgaaagaaactgagattgaaaccttagagtcaaagattggatatgaa
tttgctgtcaaaggattattgctggaggctataacacacacatctgatcaggagcttggt
gtaaattactgttaccagaggcttgaatttcttggtgattcagtgttggacttgctcatt
acttggcattattaccagacccactcagatattgacccaggcgagttgactgatttgcgt
tcagcttctgttaataatgagaattttgctcaagtggctgtgagacggaatcttcagcaa
catcttcaacattgctgtgggcttctgattggtcaaataactgaatacgtgaagtatttg
tctgagtctcttgatgctggaaagtcactgcatggcaataaaggccctaaggttcttggt
gatatggtggaaagtattgcaggtgccatactgattgacacagagcttaatcttgacgaa
gtgtggagaatatataaaccactattgactccttttgtgacccctgataaacttgaactt
cagccactcagagaattaattgaattatgtgattctcttgggtatttcatcaaagataaa
tgtactaggaagggagaaattattcatgcagaacttagattacagttacaagatgtcttg
ttgataggtgaaggatatgaacggacccgaaaagctgctagaggggaagctgctcatcgc
ttattagttcaacttgagactagaggaatttattactctcgttctggttcgaagaagaga
aaacagaatcccaatcatgttgagtctgctctggttctcccgtcatctatcaactgttct
acagaagcctgtgatcccaacttggagactcctgattctgttatggttcattcatcagcc
accaactgctctacagaaggctatagtcccggcatggacatccctgttattggaccagtc
agcctaaagaaaggaggaccacggatgactctgtttgaactatgcaagaaattgcagtgg
cctatgccaactttcaatacagtagaaaataaatcaagagtcccaatggaatttggtgaa
ggctctgagagaagaacaggattcaacagtttttggtcaaatattattttgcaaataccc
aatgctggcagtattgaatgtgaaggtgatgcccgagctgataagaagagctcgctcgac
tctgcatcactcgtcatgctcaaggaactccaacgacaaggaagagtcaatattaacgac
tcatga
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