Momordica charantia (bitter melon): 111012196
Help
Entry
111012196 CDS
T05045
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03022
Basal transcription factors
mcha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111012196
09124 Replication and repair
03420 Nucleotide excision repair
111012196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111012196
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111012196
Transcription machinery [BR:
mcha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111012196
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111012196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
111012196
NCBI-ProteinID:
XP_022141943
UniProt:
A0A6J1CM09
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MASVPSKLYADDVSLLMVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILDLNQLNEVVVI
GTGYASCKYLYNSSSHSNRGLEDGRMPALCTRLLKNLEEFVIADEQSVKEDPRGGTMSSL
LSGSLSMALCYIQKVFRSGSLHPHPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSC
YIGSHNSAFLQQASYITGGVYLKPQQMDGLFQYLSTVFATDLHSRAFLQLPKSVGVDFRA
SCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSVFGETPVDVDSVSKQKRKTPET
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgttccttcaaagctctatgcagatgatgtaagccttttgatggttttattg
gatacgaatccatttttttggagcacatcttctcttccattctccaagtttctctctcat
gtacttgctttcctgaactccattttagatctgaatcaacttaatgaggttgtggtaatt
ggtactggttatgcttcatgcaagtatctatacaactcgtcttcacattcaaatcgtggt
cttgaagatggtagaatgcctgcactttgcactcgtttattgaagaatttggaggaattc
gtgattgcggatgagcagtctgtcaaggaagaccccagaggagggaccatgtcttcactt
ctttctggatcactctccatggctttgtgctatatacagaaagttttccgttctggatct
ctccatccccatcctcgaatcctttgcttgcagggatccccagatgggcctgaacaatat
gttgcaatcatgaatgccatcttttctgctcagcgttcaatggttcccatagattcgtgt
tacataggttcacacaattctgcatttcttcagcaggcttcttacatcacgggtggagtt
tatctgaagcctcagcaaatggatggactgtttcaatatctctctactgtttttgctact
gatttgcattctcgggccttcttacaacttccaaagtccgttggtgtggattttcgtgca
tcgtgtttttgccacaaaaaaacaattgacatgggctatgtctgttcggtttgcttatct
atattctgcaagcatcacaagaaatgttctacttgtgggtcagtatttggtgagacccca
gtagatgtggattcagtgtccaaacagaagagaaaaactccagaaacatga
DBGET
integrated database retrieval system
