Momordica charantia (bitter melon): 111021351
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Entry
111021351 CDS
T05045
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111021351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111021351
Enzymes [BR:
mcha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
111021351
DNA repair and recombination proteins [BR:
mcha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
111021351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
111021351
NCBI-ProteinID:
XP_022153963
UniProt:
A0A6J1DIY8
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MKSVLQLQLQLGFRSFLNPSSVAVNLCRWRVATLVTFRTNSMASNRSSVSLSTQNGKRKD
RNSDEIVVEENDSKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQGF
VEKKTIGGVIDAVEDFGVQQTKRNSNVSPSEGETVKVETKTLTSKESVKSDEVSSCATNS
EPSRTKRKVSSEVVSRTVKHGDGVEVMQNEPWTVLAHKKPQKGWIPYNPRTMRPSPLSKD
TKSLKILSWNVNGLRALLKLGGFSALGLAEREAFDILCLQETKLQPASRSERVGGRQRSS
LGDGGFYTEKDILEIKKSLMDGYHHTYWTCSVSKLGYSGTAIISRIQPLSVRYGVGISEH
DGEGRLVVAEFDSFFLLSVYVPNSGDGLKRLSYRITQWDLSLSKYIKELEKLKPVILSGD
LNCAHQEIDIYNPAGNRRSAGFTDEERKSFETNFLEKGFVDTFRQQHPNVVGYTYWGYRH
GGRKTNRGWRLDYFLVSDSIAEKVHDSYILPDVGGSDHCPIGLVLKL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagtattacaattgcaattgcaattggggtttaggagtttcttgaatccctcg
agcgttgcagtgaatctgtgcaggtggagagttgcaacattggtaacttttcggacgaac
tcaatggcgtcgaatcggtcctctgtaagtttatccacacagaatgggaaaaggaaagat
agaaattctgatgagatcgtcgtcgaggaaaatgacagtaaagtggacattcaaagtttc
aaggatgacccgtcgagaattgaggctatgacggtccaggaattgagaatgacattaaga
agcgtaggtattttggccaaaggacggaaacacgagcttgtaactgcactgcagggattt
gtggagaagaaaacaattggtggtgttattgatgcagtagaagattttggagtgcaacaa
actaagagaaactcaaatgtatcaccttctgaaggtgaaactgtgaaagttgaaaccaaa
accttaacatcaaaggagtcagtcaaatctgacgaggtttcaagttgtgcaacaaatagt
gagccatctagaacaaagagaaaagtatcctcagaagttgttagccgcactgtaaagcat
ggggatggagtagaggtgatgcaaaatgaaccatggactgttcttgctcataagaaacct
caaaaaggttggatcccatataaccctagaaccatgaggccttcacctctttccaaggat
acaaaatctttgaaaattttatcttggaacgtcaatggtttaagagcattacttaagcta
gggggattttcagcgttgggactagctgaaagggaagcttttgatatactgtgcttacaa
gagaccaaattgcagccagctagtcggtcagagagagttggagggagacaaagatcgtcg
cttggagatggaggcttctatacggagaaggacatactggaaattaaaaagtctctcatg
gatggatatcatcatacctattggacttgtagtgtttctaaacttggttattctggaact
gcaatcatatcccggatacaaccactttcagtcagatatggtgtaggcatatcagaacac
gacggtgaagggcggcttgtggtggcggagtttgattcattttttttattaagtgtttat
gttcctaattctggagatggattaaagagactgtcatacaggattacccagtgggatcta
tctctcagtaagtatattaaggagttagaaaaattgaagcctgtgattttgtctggtgat
ctgaattgtgctcatcaagagatagacatctataatcctgcgggaaatcggagaagtgct
gggttcacagatgaagaaaggaaatcgtttgagacaaactttttggaaaaggggtttgta
gatacattcagacagcaacaccctaatgttgttggctatacatattggggttatcgtcac
ggtggacgcaaaaccaacagaggatggcggcttgactattttcttgtgtcggattcgata
gcggagaaagtgcacgactcttacatactccctgatgtgggaggcagtgatcattgtccc
atcggccttgtgctcaagctgtag
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