KEGG   Mesorhizobium ciceri biovar biserrulae: Mesci_1192
Entry
Mesci_1192        CDS       T01401                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
mci  Mesorhizobium ciceri biovar biserrulae
Pathway
mci03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mci00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mesci_1192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mci03019]
    Mesci_1192
   03400 DNA repair and recombination proteins [BR:mci03400]
    Mesci_1192
Enzymes [BR:mci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mesci_1192
Messenger RNA biogenesis [BR:mci03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Mesci_1192
DNA repair and recombination proteins [BR:mci03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Mesci_1192
SSDB
Motif
Pfam: DEAD RQC Helicase_C HRDC RecQ_Zn_bind ResIII AAA_30
Other DBs
NCBI-ProteinID: ADV10356
UniProt: E8TLX1
LinkDB
Position
1250028..1251869
AA seq 613 aa
MQAPAALATEELDPKRRVLKDVFGFDDFRPGQADVMDALLAGRHVLAVMPTGAGKSLCYQ
VPALVLGGLTIVVSPLVALMQDQVAALRLAGVAADTINSSIDRDANIAAWRRVASGQTRL
LYLAPERLMTERMLEALARLDISLIAVDEAHCISQWGPAFRREYEDLSRLRGIFPSVPII
ALTATADEGTRTDIESRLFAERVETLVLGFDRPNIKLAIEAKQDSKRQLLRFVERHPGRS
GIVYCLSRKKTEEMAAFLEKNGVTALAYHAGMSKEARDANQNSFMTLSGVVMVATIAFGM
GIDKPDVAYVFHTDMPGSLEAYYQEIGRAGRDGRDAEAHMLFGLGDIRMRRLFIDDEDAP
PEHKRRSHGRLDTLIGYCETAQCRRQVLLGYFGEEAQPCGNCDTCLDQAPRADGGAEARI
ILTAIAQSGERFGAGHVIDILLGHETEKVLARNHQRLTSFGSGLAHKKDFWLSLIRQLVA
GGFLMPDPAGHGGLAIAEKGHALGRGEVPFHYRVEVRSRALRGKMRSGQDLGQSAVDTGL
LAALKSLRLRLAKERQVPAYVVFSDRTLIDMAERRPNDLDAFAEVNGVGAAKLKEFGQVF
LSAIAEHRSGEAA
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgcaggcaccggcggccctcgcgacagaagagctggatcccaagcggcgcgtgctgaag
gacgtgttcggcttcgatgattttcgccccgggcaggccgatgtcatggacgcgttgctg
gccgggcgtcatgtgctggctgtcatgccgactggtgccggcaaatcgctctgctaccag
gtgccggcgcttgtcctgggcgggctcaccattgtcgtttcgccgctggtggcgctgatg
caggatcaggtcgccgccttgcggcttgccggcgtggccgccgatacgatcaattcctcg
atcgaccgcgatgccaatattgccgcatggcgtcgcgtcgcctcgggccagacgcgcctg
ctctatctcgcgccggagcggttgatgaccgaacggatgctcgaggcgctggccaggctc
gatatcagcctgatcgccgtcgacgaggcgcattgtatctcgcaatgggggccggcgttc
cggcgcgaatacgaggacctgtcgcgtctgcgcggcatctttcccagcgtgccgatcatc
gcgctgacggcaacggcggacgaaggcacgcgcaccgacatcgaatcccggctgtttgcc
gagcgcgtcgagaccctggtgctgggcttcgaccggccgaacatcaagcttgccatcgag
gccaagcaggacagcaagcgccaattgctgcgcttcgtcgagcgccatcccggccgcagc
ggcatcgtctattgcctgtcgcgcaagaagacggaggagatggcggccttcctcgagaag
aacggcgtcaccgcgctcgcctatcatgccggcatgagcaaggaggcgcgtgacgccaac
cagaacagcttcatgaccttgtccggcgtcgtcatggtggcgaccatcgccttcggcatg
ggcatcgacaagcctgacgtcgcctatgtcttccacaccgacatgccgggcagcctggag
gcctactaccaggagataggccgcgccggccgcgatgggcgggacgccgaggcgcatatg
ctgttcggcctgggcgatatccgcatgcgcaggttgttcatcgacgacgaggatgcgccg
cccgagcacaagaggcgctcgcatggccggctcgacacgctgataggctattgcgagacg
gcgcagtgccgccgccaggtgctgctcggctatttcggcgaggaagcgcagccctgcggc
aattgcgacacctgcctcgaccaggcaccgcgcgccgatggcggagccgaggctcggatc
atcctgacggcgatcgcccagagcggtgagcgtttcggtgccggtcatgtcatcgacatc
ctgctcggccatgaaaccgagaaggtgcttgccaggaaccaccagaggctcacgagtttc
ggcagtggtctggcgcacaagaaggatttctggctatcgctgatccggcaactcgtcgcc
ggcgggttcctgatgccggatccggccggtcatggcggcctcgccatcgccgaaaagggt
catgcgcttggccgtggcgaggtgccgttccattatcgtgtcgaggtacgcagccgcgcc
ttgcgcggcaagatgcgctccgggcaggatctcgggcagtcggctgtggacaccgggcta
ctggccgcgctcaaatccttgcgcctgcggctcgccaaggagcgccaggtgccggcctat
gtggtgttctccgatcgcacgctgatcgacatggcagagcgccgcccgaacgacctcgac
gccttcgctgaagtgaatggggttggggcggcaaagctcaaggaattcggccaggttttt
ctgagtgcgattgccgagcaccggtcgggtgaggcggcctga

DBGET integrated database retrieval system