Macrococcoides caseolyticum: MCCL_0864
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Entry
MCCL_0864 CDS
T00848
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mcl
Macrococcoides caseolyticum
Pathway
mcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCCL_0864 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcl03019
]
MCCL_0864 (pnpA)
03016 Transfer RNA biogenesis [BR:
mcl03016
]
MCCL_0864 (pnpA)
Enzymes [BR:
mcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MCCL_0864 (pnpA)
Messenger RNA biogenesis [BR:
mcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MCCL_0864 (pnpA)
Transfer RNA biogenesis [BR:
mcl03016
]
Prokaryotic type
tRNA degradation factors
MCCL_0864 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
SPATA25
Motif
Other DBs
NCBI-ProteinID:
BAH17571
UniProt:
B9EBG0
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All DBs
Position
948815..950926
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AA seq
703 aa
AA seq
DB search
MSQEKKVFKTEWAGRPLIIETGQLAKQANGAVLVRYGDTVVLSTATASKEPRDVDFFPLM
VNYEEKLYAAGKIPGGFNKREGRPGEDATLTSRLIDRPIRPLFPKGYRHDVQVISIVMSV
DPDNSPEMAAMIGSSMALAVSDIPFEGPIAGVNVGLVDGELIINPDVQQREVSVLDLQVA
GHFDAVNMVEAGAKEVAEDKMLEAIMFGHAEIKKLVEFQQSIIDEIQPVKSEFVPVEVDA
DLESKVEQLSESFGLSQAIQTQEKLAREENITAIKLKVIEAFEGEDEAVITAVNKKFDAL
IKEEVRRLITEEKVRPDGRRPDEIRPLDSEVGILPRVHGSGLFTRGQTQALSVATLGALG
EHQIIDGLGVEEEKRYMHHYNFPNFSVGETGPIRAPGRREIGHGALGERALLQVIPDEKE
FPYTIRVVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTKDENYTILSD
IQGMEDALGDMDFKVAGTKEGITAIQMDIKINGLTEDILREALEQARVGRLHIMEHMLST
ISEPRAELSQYAPKIEIIHINPDKIRDVIGPGGKKINEIIDATGVKLDIEQDGTVFIGSS
DASMIEAAKKLIENIVREAEVGQIYMATVKRIEKFGAFVEIFPGKDALVHISQIALERIN
KVEDVVKLGDQFLVKVTEIDKQGRVNASRKVLLEEEKKASEEK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaaagaaagtttttaaaacagaatgggcaggtcgtccattaattattgaa
actggccagttagcgaaacaagcaaatggtgcagtactcgtacgctacggggatacggta
gtattatcaacggcgacagcgagtaaagaacctagagatgtggacttcttcccgttaatg
gttaattatgaagagaaattatatgcagcaggtaaaatacctggaggattcaacaaacgt
gaaggccgtccgggtgaggatgctactttgacttcacgattgattgaccgcccgattcgt
ccattattcccaaaaggttatcgtcatgatgttcaggtcatttctatcgttatgagtgta
gatccggataattcacctgaaatggcagcgatgatcggttcatctatggcgcttgcggtt
tcagatattccatttgaaggaccaattgcaggtgtaaatgtaggtttagttgatggagaa
ctcatcataaatcctgacgttcagcagcgcgaagtttctgttctggacttacaagttgct
ggtcacttcgatgcggtcaacatggttgaagcgggtgcaaaagaagtagcggaagataag
atgcttgaagcaatcatgttcggtcatgctgaaatcaagaaacttgttgaattccagcaa
tcgatcattgatgagatacaacctgtaaagtctgagtttgtacctgttgaagtggatgca
gacttagaatcaaaggtagaacaattatcagaaagctttggactatctcaagcgattcag
actcaggaaaagcttgcgcgtgaggaaaatattacagcaatcaaattaaaggttatcgaa
gcttttgaaggtgaagatgaagctgttatcactgcagtgaacaagaagtttgatgcactg
atcaaagaagaagtgcgtcgtcttatcacagaagaaaaagtgcgcccggatggacgtcgc
ccagacgaaattcgaccgcttgattcagaagtcggtattttaccacgtgtacatggttcg
ggattatttacacgtggacaaacgcaggcattatcagttgcaacacttggtgcgctaggt
gagcatcagattatcgatgggcttggtgtagaagaagagaagcgttatatgcatcattat
aacttcccgaatttctctgtaggtgagactgggccaattcgcgcaccaggtcgtcgtgaa
attggccatggtgcacttggtgaacgtgcgctattgcaggtcattccagatgaaaaagaa
ttcccatatacaattcgtgttgtatcggaggttttagaatcaaatggttctagttcacaa
gcatcaatctgtggttctacgcttgccttgatggatgcgggtgtacctattaaagcacca
gttgcgggtattgcaatgggtcttgtaacaaaagatgaaaattatacaattctatctgat
atccaaggtatggaagacgcacttggtgatatggactttaaagttgcagggacaaaagaa
ggtatcacagcaatacagatggacattaagattaatgggttaacggaagatatcttacgt
gaagcattagagcaggcgcgagtaggtcgtctgcatattatggaacatatgttatctaca
atttctgaaccaagagcagaacttagccaatacgcacctaaaattgaaattattcatatt
aatcctgataagattcgtgatgttatcggaccaggtggtaagaaaatcaacgaaattatc
gatgcaacaggagttaagcttgatattgaacaagatggtacagtgttcatcggttcaagt
gatgcatcaatgatagaggcggcgaagaagttgatcgaaaatattgtacgtgaagctgag
gttggccagatttatatggcaacggtaaaacgtatcgagaagttcggtgcatttgttgaa
atcttcccaggtaaagatgcgctcgtacatatctcgcaaattgctttagaacgtataaac
aaagtagaagatgttgtgaagcttggcgatcagttcctggtgaaagtcactgagattgat
aaacaaggtcgcgtaaatgcatcacgaaaagtgctgttagaagaagagaagaaagcatca
gaagaaaaatag
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