Mesoplasma coleopterae: MCOLE_v1c06240
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Entry
MCOLE_v1c06240 CDS
T05286
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mcol
Mesoplasma coleopterae
Pathway
mcol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCOLE_v1c06240 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcol03021
]
MCOLE_v1c06240 (rpoB)
03400 DNA repair and recombination proteins [BR:
mcol03400
]
MCOLE_v1c06240 (rpoB)
Enzymes [BR:
mcol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCOLE_v1c06240 (rpoB)
Transcription machinery [BR:
mcol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MCOLE_v1c06240 (rpoB)
DNA repair and recombination proteins [BR:
mcol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MCOLE_v1c06240 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ATZ21135
UniProt:
A0A2K8P698
LinkDB
All DBs
Position
complement(714125..717979)
Genome browser
AA seq
1284 aa
AA seq
DB search
MAYKIKKVNRGVERRDYRKVSGNLELPNLIEIQTKTFEWFKTKGIDEVLNEFFAMSSNDA
SASLFLEGWEIKEAKISPAKAKEQSKIYDAPIYVDLQLMFTKTEDISKEFEEIVEKDIKK
VLANWIAEKTDSKNVSLVKNTENIYFFDVKLKGTEKNDLFQITILEEKEDVVVAEVSVRK
WGQVFFGDFPLMTDAGTFVINGSQKVIVSQLVRSPGSYFKTEINNKTGENLYNGDIIPSR
GTWLEFETDTKKTAETTNSLFVKIDKSRKTTATSFLKILGLDRDTILNIYDKDKVIVETL
KNDNDTGDTYADWAQHVQEIYKKIRQGETATSDGASKYINGLLFDRRKYDLTKAGRFKLQ
QKLAVKNRLIGRILAEDIVDANGKVLVAKNTEVSKANFKEVSEALSQDGVMVSSIEYRED
IPGSRQIQKVKVYQDNNSKDETFTIVGITPNSKEEHITVVDIVATVSYLLGLEYNIGEYD
DIDNLANRRVRTVGELLQNQFRMGLTRIDKNVKEKLSTSDLYKVKVSTIINAKPLTAVIG
EFFNLSQLSQFMDQINPLAELTNKRRLTALGPGGLSRDRASLEVRDVHPSHYGRICPIET
PEGPNIGLINNLSTYAIVDELGFIRTPYLKVIDGVIQNEHEYLSADEEKEYIISQSNVTK
DENGKILDETVVSRYKGDDYIAKVSEVQFIDVSPKQIVSVATSAIPFLENDDANRALMGA
NMQRQAVPTIVPESPFVGTGIEFEAARDSGVCVVAAENGIVKYVDAKQITVESKAGIKTY
TLANFERSNNGSSIVQKPIVKVGDSIEAGQIIADGPSVDNGELALGQNVVVAFTTYNGYN
FEDAIVMSERVIMEDKFTSVHIDEYVLEVRNTKQGAEEITSEIPNISDNAKKYLDNEGIV
AIGTEVKTGDILVGKVTPKGQTQLSPEDKLLHAIFGEKSRSVKDNSLKVPNGGEGIVQSV
KRFKAKSAANPDGIDLPADVLEVIKVYIVQKRKIQEGDKMSGRHGNKGIISKVLPVEDMP
HLEDGTPVDILLNPQGIPSRMNIGQILEIHLGMAAKKLGVKIATPVFEGVNSNDLDEIMA
EAGMENYGKVKLIDGQTGEAIDKPISVGVMYMLKLSHMVDDKLHARSVGPYSLITQQPLG
GKAQNGGQRFGEMEVWALEAYGAAHTLREILTIKSDDLKGRTKTYEAIVRSRNIPTPGTP
ESFNVLSKEIMGLGFDIYLLDDKGNKSQINAYDDDNDLINDESMKHASTDKLTFEDSVSL
VEIEDLDSFEEVDESEINLSFEEE
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggcatataaaattaaaaaagtaaaccgtggcgttgaaagacgtgattatagaaaagtt
tcaggtaatcttgaattaccaaacttaattgaaattcaaacaaaaactttcgaatgattc
aaaacaaaaggaattgacgaagtattaaacgaattttttgcaatgagttcaaatgatgct
agtgcatctcttttcttagaagggtgagaaattaaagaagctaaaatttcaccagcaaaa
gcaaaagaacaatcaaaaatttatgatgctccaatttatgtagatttacaattaatgttt
acaaaaactgaagacatctcaaaagaatttgaggaaattgtagaaaaagatattaaaaaa
gttttagcaaattgaattgctgaaaaaacagactcaaagaatgtttcacttgttaaaaat
acagaaaacatttatttctttgatgttaaattaaaaggtacagaaaaaaatgacttattt
caaattacaatcttagaagaaaaagaagatgtagttgtggctgaagttagtgtaagaaaa
tgaggacaagtattctttggagacttcccattaatgactgacgctggaacatttgttatt
aatggttcacaaaaagttattgtttcacaattagttagatcacctggttcatactttaaa
acagaaatcaacaacaagacaggggaaaacctatacaatggtgatattattccaagtcgt
ggtacttgattagagtttgaaacagatactaaaaaaactgctgagacaacaaattcatta
tttgttaaaattgataaatcaagaaaaactactgcaacatcattcttaaagattttagga
ttagacagagatacaatcttaaatatttatgataaagataaggttattgttgaaacatta
aaaaatgacaatgatactggagatacatacgcagactgagcacaacatgtgcaagaaatt
tataaaaaaattagacaaggtgaaacagctacttctgatggagcctcaaaatacattaac
ggattattatttgaccgtagaaaatatgatttaacaaaagcaggaagattcaaattacaa
caaaaattagctgttaaaaaccgtttaatcggaagaatattagctgaagatattgttgat
gcaaacggaaaagttttagttgctaaaaacactgaagtttctaaagcaaactttaaagaa
gtttctgaagcattatcacaagatggtgtaatggtttcttcaattgaatacagagaagac
attcctggttcacgtcaaattcaaaaagttaaagtttaccaagacaataactcaaaagac
gaaacatttacaattgttggaattactcctaactcaaaagaagaacatattacagttgtt
gatattgtagctactgtttcttacttattaggattagaatacaacattggtgaatacgat
gacattgataacttagctaaccgtcgtgttagaacagttggtgaattattacaaaatcaa
ttcagaatgggattaacacgtattgataaaaacgttaaagaaaaactttcaacaagtgat
ttatataaagttaaagtttcaacaattattaatgcaaaaccattaactgctgtaattgga
gagtttttcaacttatcacaattatcacaattcatggatcaaattaacccactagcagaa
ttaacaaataaacgtagattaactgctttaggacctggaggattatcaagagatcgtgcc
agcttagaagtgcgtgacgttcacccttctcactacggaagaatctgtcctattgaaaca
ccagagggaccaaacattggattaattaacaacttgtcaacttatgcaatcgttgatgaa
ttaggattcattagaacaccttacttaaaagttattgatggtgtaattcaaaatgaacac
gaatacttatcagctgatgaggaaaaagaatacattatttctcaatcaaatgttacaaaa
gatgaaaatggaaaaattttagatgaaactgtagtttcacgttacaaaggtgatgattac
attgctaaagtaagtgaagttcaatttattgacgtttcaccaaaacaaattgtttctgtt
gctacttcagcgattccgttcttagaaaatgatgacgctaaccgtgcacttatgggtgcc
aacatgcaacgtcaagcggttcctacaattgttccagaatcaccattcgttggaacaggt
attgaatttgaagcagctagagactcaggagtatgtgttgttgctgcagaaaacggaatt
gttaaatatgtagatgcaaaacaaataactgttgaatcaaaagctggaattaaaacatat
acattagcaaactttgaacgttcaaataatggaagttcaattgttcaaaaaccaattgtt
aaagttggtgattcaattgaagctggacaaattattgcagatggaccatctgttgataat
ggagagttagctttaggtcaaaacgttgttgttgcctttactacatataatggatacaac
ttcgaggatgccattgttatgtctgaaagagttatcatggaagataaatttacttcagta
cacatcgatgaatatgtattagaagttcgtaacacaaaacaaggagctgaagaaattact
tcagaaatcccaaacatcagtgacaatgctaaaaaatacttagacaatgaaggaattgta
gctattggtactgaagttaaaacaggagatattttagtaggtaaagtaactccaaaagga
caaactcaattatcaccagaagataaattattacatgctatctttggagaaaaatcaaga
tcagttaaagacaactcattaaaagttccaaatggtggagaaggaattgttcagtctgtt
aaacgtttcaaagctaaatcagcagcgaacccagatggtattgatttaccagctgatgta
ttagaagtaattaaagtttatatcgttcaaaaacgtaaaatccaagaaggggataaaatg
tcaggacgtcacggtaacaaagggattatctcaaaagtgttaccagttgaagacatgcct
cacttagaagatggaacaccagtagatattctattaaacccacaagggattccttcacgt
atgaacattggacaaatcttagaaatccatttaggaatggctgctaaaaaattaggagtt
aaaattgcaactccagttttcgaaggagttaacagtaatgatttagatgaaatcatggct
gaagctggaatggaaaactatggaaaagttaaattaattgatggtcaaacaggagaagca
attgataaaccaatttctgttggggttatgtacatgttgaaactttctcacatggttgat
gacaaacttcatgcaagaagtgttggaccatactcattaattactcaacaacctcttgga
ggaaaagcacaaaacgggggacaacgtttcggagaaatggaagtttgagcgttagaagct
tatggggcagcgcatactctaagagaaatcttaactattaaatcagatgacttaaaaggt
cgtacaaaaacttatgaagctatcgtaagatcaagaaatattcctacacctggaacacct
gaatcattcaatgttctttcaaaagaaattatgggattagggtttgatatttacttatta
gacgataaaggtaataagtcacaaattaatgcatatgatgatgacaatgatttaatcaat
gacgaaagcatgaagcatgcatcaactgacaaattaacttttgaagattcagtatcactt
gttgaaattgaagacttagatagttttgaagaagtggatgaaagtgaaattaacctttca
tttgaagaagaatag
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