Mycobacterium canettii CIPT 140060008: BN44_110049
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Entry
BN44_110049 CDS
T02419
Name
(GenBank) Putative transcriptional regulatory protein (Probably tetR-family)
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
mcq
Mycobacterium canettii CIPT 140060008
Brite
KEGG Orthology (KO) [BR:
mcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcq03000
]
BN44_110049
Transcription factors [BR:
mcq03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
BN44_110049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
TetR_C_29
TetR_C_17
TetR_C_11
TetR_C_4
Motif
Other DBs
NCBI-ProteinID:
CCK53562
LinkDB
All DBs
Position
complement(4018008..4018610)
Genome browser
AA seq
200 aa
AA seq
DB search
MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE
LLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPR
FSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTA
QQVGQQYLAIVLGGITKEGV
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggatcgagtggccggtcaggtcaatagccggcgaggcgagttgctggagctcgcggcg
gcgatgttcgccgagcgcggactgcgcgccaccaccgtgcgcgatatcgccgacggcgcc
ggcatcctatccggcagcctgtatcaccatttcgcctccaaagaggagatggtcgatgag
ctgttacgcggtttcctcgattggctcttcgcccgttaccgcgacatcgtggatagcacg
gccaatccgctggagcggctgcagggcctgttcatggcgtcgtttgaggcgatcgagcat
catcacgcgcaagtggtgatctaccaggatgaagcgcaacggctggcgtcgcaacccagg
ttttcctacatcgaggaccgtaacaagcagcagcgcaagatgtgggtggacgtgctcaac
cagggcatcgaagagggctacttccggcccgacctagacgtcgacctggtctaccgattc
atccgtgacaccacctgggtgtcggtgcgctggtatcgacccggtgggccgctcaccgcc
cagcaggtgggccagcaatacctagccatcgtgcttggcgggatcaccaaagagggagtc
tga
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integrated database retrieval system
