Mycoplasmopsis californica ST-6: MCFN_01965
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Entry
MCFN_01965 CDS
T03247
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mcr
Mycoplasmopsis californica ST-6
Pathway
mcr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MCFN_01965 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcr03400
]
MCFN_01965 (fpg)
Enzymes [BR:
mcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MCFN_01965 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MCFN_01965 (fpg)
DNA repair and recombination proteins [BR:
mcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MCFN_01965 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF5517
DUF2375
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
AIA29534
UniProt:
A0A059XLX4
LinkDB
All DBs
Position
469389..470213
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AA seq
274 aa
AA seq
DB search
MPEMPEVTTVVRSLQPKIVGSKILKVLIYKEKLIKDINAEDFKLSIENRQIKNIFNVGKH
IIIALEGDIFILNHLRMSGKYSFYQKWHEPTLHDHVVFELSNGFLYFNDARAFATFHLKS
ADKLYSTSPLNKLGKVPFETDIDWLYKKIAKKSSPIKNILLDQSLVLGIGNIYANESLFE
CSLHPNTPANFLTKNQLNNLIQTAGKIMDIATQMGGSSIQSYSSLNGQKGSYQNLLKVHG
KNGQKCLKCSDSIQKIWVGGRGSYFCPSCQQETK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaatgccagaagttacaacggttgttcgttcattacaacccaaaattgtaggt
tcaaaaattctaaaagtattaatttacaaagaaaaactaataaaagatattaatgctgag
gattttaaactatcaattgaaaatcgccaaattaaaaatattttcaatgttggtaagcat
ataattattgcacttgagggcgatatcttcattttaaatcatttaagaatgagtgggaaa
tatagtttttaccaaaaatgacatgaaccaaccctgcatgaccacgttgtatttgaatta
tcaaatggttttttatattttaatgatgcacgcgcttttgctacattccatcttaaaagc
gcagataaactatattcaacctcacctttgaataaacttggtaaagtaccatttgaaact
gatattgactgattgtacaaaaagatagcgaaaaaatcttcgccaatcaaaaacatatta
cttgatcaatcattagttttaggtataggtaatatctacgctaatgaatcgctttttgag
tgttcgttacaccctaacacacctgctaattttttaacaaaaaatcagcttaacaattta
atccaaactgccggtaaaattatggatattgccacccaaatgggcgggagtagtattcaa
tcttattcatcattaaacgggcaaaaagggagctatcaaaacttattaaaagttcatggt
aaaaacggacaaaaatgcctaaaatgctcagattcaatccaaaaaatatgagtaggtggg
cgtggaagttacttttgccctagttgtcagcaggagacaaaataa
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