Moraxella cuniculi: NCTC10297_01951
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Entry
NCTC10297_01951 CDS
T06646
Symbol
rnr
Name
(GenBank) Ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mcun
Moraxella cuniculi
Pathway
mcun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10297_01951 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcun03019
]
NCTC10297_01951 (rnr)
03016 Transfer RNA biogenesis [BR:
mcun03016
]
NCTC10297_01951 (rnr)
Enzymes [BR:
mcun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NCTC10297_01951 (rnr)
Messenger RNA biogenesis [BR:
mcun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC10297_01951 (rnr)
Transfer RNA biogenesis [BR:
mcun03016
]
Prokaryotic type
tRNA degradation factors
NCTC10297_01951 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
Motif
Other DBs
NCBI-ProteinID:
VEG13968
UniProt:
A0A3S4UM58
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All DBs
Position
1:2106313..2108601
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AA seq
762 aa
AA seq
DB search
MTNKTKKTKWNDPNAAIEASKYQNPIPSRLLILQTVAALTNQAQAATQESLAMHFGFLDD
GDRFFALTNRLKAMLRDGQLERSDGIHFSVAPLPTVLSGTVSCSPKGFGFVVLDDMPDLF
LHEKQMRLVFDGDKVEVVATQYRGKDEARITKVTERNQLEFIGKLSSDDEGYFVQLTGVN
AHQPITVTTENVEEMNAGVGDDVKVALIDLPSYQEFATGKITELLSSLNDRELIIETTLY
NYGIPHEFSHAAIKQAELFNEPNEKDYKGRVDLRHLPLVTIDGEDSRDFDDAVYAEKRAG
GNYRVVVAIADVSHYVTPQSALDSDAYERGTSVYFPHRVIPMLPEILSNGLCSLNPKVDR
LCMVADIKLSRAGKVTAYEFYPAIMHSQARLTYNQVNAYFNDPTNETLPDELVKNPAVLK
SIDTLHQLYQVLDKRREERGAMAFETAETYIKFGKDGDIIDIVARTRGEAHKLIEECMLL
ANTCAANFALKHDLPVLYRNHDKPNEEKSARLHDYVKNFGLSFPESSPTHEDYQRIIKAT
ADRPDAASIHSMLLRSMMQANYSPDNIGHFGLAYDEYSHFTSPIRRYPDLMLHRAIKDKV
SKQKPQAPIYKTLHEAGEQTSLTERRAEEASRDVETWLKCHYMQRHLGEQFTATVSSVTS
FGLFAVLNDLFIEGLVHISGLGNEYFDYDEQEQKLVGDKGSYFGLGDTLLIEVAAVNMDL
LQIDFRLIEQLGRVDRDGVSKKLSKKSSDKPKNKRKKSSKTS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacaaaacaaaaaaaaccaaatggaatgacccaaatgccgccattgaggcttca
aaataccaaaaccccattccttcacgcttattaatcctacaaacagtcgctgctttgacc
aatcaagcacaggctgccacccaagaatcgctggcaatgcactttggctttttggacgat
ggagatcgtttttttgccttgaccaatcgactaaaagccatgctaagagatggacagctt
gaacgcagtgatggcattcattttagcgtcgcccccttgccaactgtgctgtcaggcacg
gtcagctgtagcccaaaaggctttggctttgtggtgcttgatgatatgcctgatttgttt
ttgcacgaaaagcagatgcgattggtgtttgatggtgataaagttgaagtggttgccaca
caatatcgtggcaaagacgaagcacgcattaccaaagttaccgaacgcaatcagctggag
tttatcggtaaattaagctctgatgacgaagggtattttgtacagcttacaggtgtcaat
gcccatcagcccatcaccgttaccaccgaaaatgtcgaagagatgaatgcaggcgttggt
gatgatgtcaaggtggcactgattgatctgccaagttatcaagaatttgccactggcaaa
atcaccgaactgcttagtagcttaaatgaccgtgagctgattattgagaccacgctgtat
aattatggcattccgcatgaatttagccatgccgccatcaaacaagcagagctttttaat
gagccaaacgaaaaagattataaaggcagagttgatttgcgtcatttgcctttggttacc
attgatggtgaagattcacgagattttgacgatgcggtctatgccgaaaagcgtgctggt
ggcaactatcgtgtcgttgttgccattgctgatgtcagccactatgtaacgccacaatca
gcactagatagcgatgcttatgagcgtggcacttcggtatattttccccatcgtgtgata
ccgatgctgccagagatactgtcaaatggactgtgttcactcaatcccaaagtggacaga
ctgtgcatggtcgctgatattaaattatctcgtgcaggcaaggttaccgcttatgaattc
taccctgccatcatgcactcacaggctcgcctgacttataatcaagtcaatgcgtatttt
aatgacccgactaacgaaacgctgcctgatgaacttgtcaaaaaccctgcggttcttaaa
tccattgacacactacaccaactgtatcaagtgcttgacaaacgccgcgaagagcgtgga
gcgatggcatttgaaacagcagaaacttacataaaatttggcaaagatggtgatattatt
gacatcgttgctcgtactcgtggcgaggctcacaagctcatcgaagagtgtatgttgctt
gccaatacctgtgcggcaaactttgctctaaaacacgatttgcccgtcttgtatcgcaat
catgacaagccaaacgaagaaaaatcagccagattgcatgactatgtcaaaaatttcggt
ctgtcatttcccgaatcatcgcccacgcacgaagactatcagcgaatcatcaaggcaact
gccgacagaccagatgccgccagcattcatagtatgctacttcgctcaatgatgcaggcg
aactacagcccagataatatcggtcattttggcttggcttatgatgaatacagccatttc
accagtccaattcgccgctaccctgacctaatgctccaccgtgccatcaaggataaagtg
agcaaacaaaaaccacaagcacccatttacaaaaccctgcatgaggcaggtgaacaaacc
agcctaaccgaacggcgtgccgaggaggcatctcgtgatgtagaaacttggctaaaatgc
cactatatgcagcgtcatctgggcgagcaatttaccgcaacggtcagcagcgttaccagt
tttggcttatttgccgtgctaaacgacttattcatcgaaggcttggtgcatatttcgggg
ctgggcaatgagtattttgattatgatgaacaagaacaaaaacttgttggcgacaaaggc
tcctattttggcttgggtgatacgctgcttatcgaagtggcggcggttaatatggattta
ctacaaattgattttcgtttgattgaacaattaggtcgtgttgatcgtgatggagtcagc
aaaaaactctccaaaaaatcaagcgacaagccaaaaaacaaacgcaaaaaatccagcaaa
acttcataa
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