Mycobacterium canettii CIPT 140070008: BN43_40436
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Entry
BN43_40436 CDS
T02420
Name
(GenBank) Conserved protein of unknown function
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mcv
Mycobacterium canettii CIPT 140070008
Pathway
mcv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN43_40436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcv03019
]
BN43_40436
Messenger RNA biogenesis [BR:
mcv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN43_40436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
CCK56792
LinkDB
All DBs
Position
complement(3107890..3109566)
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AA seq
558 aa
AA seq
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MDVDLPPPGPLASGGLRVTALGGINEIGRNMTVFEHLGRLLIIDCGVLFPGHDEPGVDLI
LPDMRHVEDRLDDIEALVLTHGHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREYR
ITPVFVEVREGQSTRHGVFECEYFAVNHSTPDALAIAVYTGAGTILHTGDIKFDQLPPDG
RPTDLPGMSRLGDTGVDLLLCDSTNAQIPGVGPSESEVGPTLHRLIRGADGRVIVACFAS
NVDRVQQIIDAAVALGRRVSFVGRSMVRNMRVARQLGFLRVADSDLIDIAAAETMAPDQV
VLITTGTQGEPMSALSRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDVLSKIGA
RVVTNAQARVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASTGVPQESI
LLAENGVSVDLVAGKASISGAVPVGKMFVDGLIAGDVGDITLGERLILSSGFVAVTVVVR
RGTGQPLAAPHLHSRGFSEDPKALEPAVRKVEAELESLMAANVTDPIRIAQGVRRTVGKW
VGETYRRQPMIVPTVIEV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtagaccttcccccgccaggtcccctggcctccggcgggttgcgggtcaccgcg
ctgggcggcatcaacgaaatcggccgcaacatgacggttttcgaacacctgggccgactg
ttgattatcgactgcggtgtgttgtttcctggccacgacgagcccggtgtcgatctgatc
ctgccggacatgcgccatgtcgaagaccggcttgacgacatcgaggcgctggtgttgacc
cacgggcacgaggaccacatcggggcgattccgtttctgctcaagctgcgacccgacatc
ccggtcgtcggctcgaagttcaccttggctctggttgcagagaaatgtcgtgagtaccgc
ataacaccggtgttcgtcgaggtccgcgagggccagagcacccggcacggcgtgtttgag
tgcgagtacttcgccgtcaaccattccactccggacgcgttggccatcgcggtgtatacc
ggcgcgggaaccatcctgcacaccggcgacatcaagttcgaccaattgccaccggacggc
cgtcccaccgatctaccgggcatgtcgcggctcggcgacaccggcgtggacctgttgctg
tgcgactcgacgaacgcccagatccccggtgtcgggccatcggaaagcgaagtgggccca
acgctgcaccggctcatccggggtgccgacggacgggtgatagttgcgtgtttcgcctcc
aacgtggatcgggtacagcagatcatcgatgccgcagtggcattgggccggcgagtgtcg
ttcgtcggccgatcgatggtgcgcaacatgcgcgtcgcaaggcaactgggcttcctacga
gtggctgattccgatctcatcgacatcgccgccgccgaaacgatggcgcccgaccaagtt
gtgttgatcaccaccggcacccaaggcgagccgatgtcggcgttgtcgcgaatgtcgcgt
ggggagcatcgcagcatcacgttgactgctggtgatctcatcgtgttgtcgtcgtcgctg
atccccggcaacgaggaggcggtcttcggagtcatcgatgtactgtccaagatcggcgcc
agagtcgtcaccaacgcccaagcaagggtgcatgtttccggccacgcgtacgccggtgag
ctgctgttcctctacaacggggtgcggccgcgcaacgtgatgccggtgcacggaacctgg
cggatgctgcgcgccaatgccaagctggccgccagtaccggcgtaccgcaagagtcaatt
ctgttggccgagaacggtgtcagcgtcgacctggttgccggcaaagccagtatctccggt
gcggtgccggtgggcaagatgttcgtcgacggcttgatcgccggcgacgtcggcgatatc
accctgggcgagcggctcattttgtcgtcgggctttgtcgcggtgaccgtcgtggtcaga
cgtggcaccggccagccgttggctgcgccacatctacactcgcggggtttctccgaagat
cccaaggcgctcgaacccgccgtgcgcaaggtggaggcagagctggaatcgttgatggcc
gccaacgtcaccgatccgatccggatcgctcaaggggtgcgccgcacggtcggcaagtgg
gtgggggaaacctatcgccgccagccgatgattgtgccgacggtcatcgaggtgtaa
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