Mycobacterium canettii CIPT 140070010: BN42_40679
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Entry
BN42_40679 CDS
T02421
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA (Sigma-A)
KO
K03086
RNA polymerase primary sigma factor
Organism
mcx
Mycobacterium canettii CIPT 140070010
Brite
KEGG Orthology (KO) [BR:
mcx00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BN42_40679 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcx03021
]
BN42_40679 (sigA)
Transcription machinery [BR:
mcx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN42_40679 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
CCK60805
LinkDB
All DBs
Position
3141192..3142754
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AA seq
520 aa
AA seq
DB search
MAATKASTATDEPVKRTATKSPAASASGAKAGAKRTAAKSASGSPPAKRATKPAARSVKP
ASAPQDTTTSTIPKRKTRAAAKSAAAKAPSARGHATKPRAPKDAQHEVATDPEDALDSVE
ELDAEPDLDVEPGEDLDLDAADLSLEDLEDDVAPDADDDLEVIEAEAAVAPGQTADDDEE
IAEPTEKDKASGDFVWDEDESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVE
LAKRIEAGLYATQLMTELSERGEKLPAAQRRDMMWICRDGDRAKNHLLEANLRLVVSLAK
RYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRI
PVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIG
DEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLDTLSEREAGVVRLRFGLTDGQPRT
LDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgaccaaggcaagcacggcgaccgatgagccggtaaaacgcaccgccaccaag
tcgcccgcggcttccgcgtccggggccaaggccggcgccaagcgaacagcggcgaagtcc
gctagtggctctccacccgcgaagcgggctaccaagcccgcggcccggtccgtcaagccc
gcctcggcaccccaggacactacgaccagcaccatcccgaaaaggaagacccgcgccgcg
gccaaatccgctgccgcgaaggcaccgtcggcccgcggccacgcgacaaagccacgggcg
cccaaggatgcccaacacgaagtcgcaacggatcccgaggacgccctggactccgtcgag
gagctcgacgctgaaccagacctcgacgtcgagcccggcgaggacctcgaccttgacgcc
gccgacctcagcctcgaggacctcgaggacgacgtggcgccggacgccgacgacgacctc
gaggtcatcgaggctgaagcggccgtcgcgcccggccagactgccgatgacgacgaggag
atcgctgagcccaccgaaaaggacaaggcctccggtgatttcgtctgggatgaagacgag
tcggaggccctgcgtcaagcacgcaaggacgccgaactcaccgcatccgccgactcggtt
cgcgcctacctcaaacagatcggcaaggtagcgctgcttaacgccgaggaagaggtcgag
ctagccaagcggatcgaggctggcctgtacgccacgcagctgatgaccgagctgagcgag
cgcggcgaaaagctgcctgccgcccagcgccgcgacatgatgtggatctgccgcgacggt
gatcgcgcgaaaaaccatctgttggaagccaacctgcggctggtggtgtcgctggccaag
cgctacaccggccggggcatggcgtttctcgacctgatccaggaaggcaatctgggtctg
atccgcgcggtagagaagttcgactacaccaaaggctacaagttctccacctacgccacg
tggtggattcgccaggccatcacccgagccatggccgatcaggcccgcaccatccgcatc
ccggtgcacatggtcgaggtgatcaacaaactgggccgcatccagcgcgagctgctgcag
gacctgggccgcgagcccacgcccgaggagctggccaaggagatggacatcaccccggag
aaggtgctggaaatccagcaatacgcccgcgaaccgatctcgttggaccagaccatcggc
gacgagggcgacagccagctcggcgatttcatcgaagacagcgaggcggtggtggccgtc
gacgcggtgtccttcaccttgctgcaggatcaactgcagtcggtgctggacacgctctcc
gagcgcgaggccggggtggtacggctgcgtttcggcctcaccgacggccagccgcgcacc
cttgacgagatcggccaggtctacggcgtgacccgggaacgcatccgccagatcgaatcc
aagactatgtcgaagttgcgccatccgagccgctcacaggtcctgcgcgactacctggac
tga
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